DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and Lyzl1

DIOPT Version :9

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001102352.1 Gene:Lyzl1 / 364745 RGDID:1559869 Length:148 Species:Rattus norvegicus


Alignment Length:132 Identity:47/132 - (35%)
Similarity:71/132 - (53%) Gaps:6/132 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLAREMSKLGVPR---DQLAKWTCIAQHESSFRTGVVGPA 62
            |||..|...:....:..:::...||.||:...|.|:..   ..|..|.|:|.:||.:.|. ....
  Rat     1 MKAVGVFALIMSLGIVAESKVYTRCKLAKVFVKAGLDNYGGFTLGNWLCMAYYESHYNTS-AETV 64

  Fly    63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQRQ-QGWTAWST 126
            ..:||.||||||||:..||:... :...|.|.::|:||.|||:|:::.||:||.:: ||...|..
  Rat    65 LEDGSTDYGIFQINSFTWCRNGK-KHQKNHCHVACSALTTDDLTDAILCAKKIVKETQGMNYWQG 128

  Fly   127 WK 128
            ||
  Rat   129 WK 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ1 20..141 CDD:197612 43/113 (38%)
Lyzl1NP_001102352.1 LYZ1 20..143 CDD:238066 43/113 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347563
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8912
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X173
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.960

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