DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and Lyzl4

DIOPT Version :9

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:XP_006244185.3 Gene:Lyzl4 / 363168 RGDID:1308401 Length:265 Species:Rattus norvegicus


Alignment Length:131 Identity:41/131 - (31%)
Similarity:70/131 - (53%) Gaps:9/131 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQ---LAKWTCIAQHESSFRTGVVGPA 62
            |:.:||:..::.......|..:.||.:|:::...|:...:   |..|.|:|..||.|....|...
  Rat   121 MQLYLVLLLISYLLTPIGASILGRCVVAKKLYDGGLNYFEGYSLENWVCLAYFESKFNPSAVYEN 185

  Fly    63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQR-QQGWTAWST 126
            :.:||..:|:|||.:..||.  .|:   |.|.:||.|||..::.::::||:||.: :||..||..
  Rat   186 SRDGSTGFGLFQIRDNEWCD--HGK---NLCSVSCTALLNPNLKDTIECAKKIVKGKQGMGAWPV 245

  Fly   127 W 127
            |
  Rat   246 W 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ1 20..141 CDD:197612 37/112 (33%)
Lyzl4XP_006244185.3 LYZ_C 141..263 CDD:340383 37/111 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347507
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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