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Protein Alignment LysP and Lyzl4
DIOPT Version :9
Sequence 1: | NP_476828.1 |
Gene: | LysP / 38129 |
FlyBaseID: | FBgn0004429 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006244185.3 |
Gene: | Lyzl4 / 363168 |
RGDID: | 1308401 |
Length: | 265 |
Species: | Rattus norvegicus |
Alignment Length: | 131 |
Identity: | 41/131 - (31%) |
Similarity: | 70/131 - (53%) |
Gaps: | 9/131 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKAFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQ---LAKWTCIAQHESSFRTGVVGPA 62
|:.:||:..::.......|..:.||.:|:::...|:...: |..|.|:|..||.|....|...
Rat 121 MQLYLVLLLISYLLTPIGASILGRCVVAKKLYDGGLNYFEGYSLENWVCLAYFESKFNPSAVYEN 185
Fly 63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQR-QQGWTAWST 126
:.:||..:|:|||.:..||. .|: |.|.:||.|||..::.::::||:||.: :||..||..
Rat 186 SRDGSTGFGLFQIRDNEWCD--HGK---NLCSVSCTALLNPNLKDTIECAKKIVKGKQGMGAWPV 245
Fly 127 W 127
|
Rat 246 W 246
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LysP | NP_476828.1 |
LYZ1 |
20..141 |
CDD:197612 |
37/112 (33%) |
Lyzl4 | XP_006244185.3 |
LYZ_C |
141..263 |
CDD:340383 |
37/111 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166347507 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2BPI7 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG46733 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1551203at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11407 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.860 |
|
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