DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysP and Lyzl6

DIOPT Version :10

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001129305.2 Gene:Lyzl6 / 287751 RGDID:1306968 Length:149 Species:Rattus norvegicus


Alignment Length:137 Identity:48/137 - (35%)
Similarity:67/137 - (48%) Gaps:7/137 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLAREMSKL---GVPRDQLAKWTCIAQHESSFRTGVVGPA 62
            |...|.||.::...|......::||:|||.:.:.   |.....|..|.|:|..||.|....| ..
  Rat     2 MMRVLFICVVSCLLVVNDGSIINRCTLARILYQEDLDGFEGYSLPHWLCLAFVESKFNISKV-TE 65

  Fly    63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKI-QRQQGWTAWST 126
            |::|:.||||||||::|||...... |.|.|.|.|..||..::..|:.||:.| ....|...|..
  Rat    66 NADGTFDYGIFQINSRYWCNDYQSH-SENFCRLDCEELLNPNLIPSIHCAKMIVSGSGGMKNWVD 129

  Fly   127 WK-YCSG 132
            |: :|.|
  Rat   130 WRLHCLG 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ_C_invert 20..140 CDD:381618 43/118 (36%)
Lyzl6NP_001129305.2 LYZ_C 22..146 CDD:340383 43/117 (37%)

Return to query results.
Submit another query.