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Protein Alignment LysP and Spaca3
DIOPT Version :9
Sequence 1: | NP_476828.1 |
Gene: | LysP / 38129 |
FlyBaseID: | FBgn0004429 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099290.1 |
Gene: | Spaca3 / 287557 |
RGDID: | 1306684 |
Length: | 163 |
Species: | Rattus norvegicus |
Alignment Length: | 137 |
Identity: | 49/137 - (35%) |
Similarity: | 75/137 - (54%) |
Gaps: | 15/137 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 AFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQ---LAKWTCIAQHESSFRTGVVGPANS 64
|:|:.|.| .:::|:...||.||:.:...|:...: ||.|.|:|.:.|.|.|..| ...:
Rat 23 AYLLSCLL----ASSKAKVFSRCELAKVLHDFGLEGYRGYNLADWICLAYYTSGFNTDAV-DHEA 82
Fly 65 NGSNDYGIFQINNKYWCK--PADGRFSYNECGLSCNALLTDDITNSVKCARKI-QRQQGWTAWST 126
:||.:.|||||:::.||| ..:|. |.|.:.|..||::|:.:||.|..|| |..||...|.:
Rat 83 DGSTNNGIFQISSRKWCKNLAPNGP---NLCRIYCTDLLSNDLKDSVACVMKIAQEPQGLGYWES 144
Fly 127 WK-YCSG 132
|| :|.|
Rat 145 WKHHCQG 151
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LysP | NP_476828.1 |
LYZ1 |
20..141 |
CDD:197612 |
44/120 (37%) |
Spaca3 | NP_001099290.1 |
LYZ_C |
36..161 |
CDD:340383 |
44/120 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166347571 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2BPI7 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1551203at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm8912 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11407 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X173 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.850 |
|
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