DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and spacal

DIOPT Version :10

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:XP_002935753.1 Gene:spacal / 100493330 XenbaseID:XB-GENE-29081647 Length:140 Species:Xenopus tropicalis


Alignment Length:137 Identity:45/137 - (32%)
Similarity:66/137 - (48%) Gaps:12/137 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLAREMSK---LGVPRDQLAKWTCIAQHESSFRTGVVGPA 62
            ||..|:|  :...|:|..:..:||||:.|.:.:   .|:....|..:.|:|.|.|.:.|.:    
 Frog     1 MKICLMI--VVAAALAGNSWALDRCSVVRAIRRGGLAGIKGYSLGDFVCLAYHASRYDTSL---- 59

  Fly    63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKI-QRQQGWTAWST 126
             .....:|||||||:.:||.........|.|.:.|..||..:|.:.|||.::| ....|..||..
 Frog    60 -HRSPTEYGIFQINSYWWCDDGKTPGRKNVCRIPCRNLLNTNIADDVKCVKRIVSDPNGLAAWEP 123

  Fly   127 W-KYCSG 132
            | |||.|
 Frog   124 WKKYCRG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ_C_invert 20..140 CDD:381618 39/118 (33%)
spacalXP_002935753.1 LYZ_C 20..140 CDD:340383 39/116 (34%)

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