DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and LOC100493166

DIOPT Version :9

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:XP_031750467.1 Gene:LOC100493166 / 100493166 -ID:- Length:121 Species:Xenopus tropicalis


Alignment Length:128 Identity:39/128 - (30%)
Similarity:60/128 - (46%) Gaps:11/128 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLA---REMSKLGVPRDQLAKWTCIAQHESSFRTGVVGPA 62
            ||..|:|  :...|:|..:..:|:||:.   |.....|:...:|..:.|:|.|.|.:.|.:    
 Frog     1 MKICLMI--VVAAALAGNSWALDKCSVVEAFRNSGLAGIKGYKLEDFVCLAYHASRYDTSL---- 59

  Fly    63 NSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKI-QRQQGWTAW 124
             .....:|||||||:.:||.........|.|.:.|..||..||.:.|:|.::| ....|..||
 Frog    60 -HRSPTEYGIFQINSYWWCDDGKTPGRKNWCRMPCTDLLDTDIEDDVRCVKRIVSDPNGLEAW 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ1 20..141 CDD:197612 33/109 (30%)
LOC100493166XP_031750467.1 Lyz-like 20..121 CDD:412234 31/105 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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