DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysE and CG8492

DIOPT Version :10

Sequence 1:NP_476827.2 Gene:LysE / 38128 FlyBaseID:FBgn0004428 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_648151.2 Gene:CG8492 / 38866 FlyBaseID:FBgn0035813 Length:1360 Species:Drosophila melanogaster


Alignment Length:120 Identity:48/120 - (40%)
Similarity:70/120 - (58%) Gaps:10/120 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GRTLDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQINNYYWCA 81
            |:..:||.||:|: .:...|...||.|.||||||||:.|..||..|.:||.|:|:|||::.|||.
  Fly   438 GKVYNRCELAQELYFSHKFPMQDLATWVCIAEHESSFNTTAVGRLNADGSADHGLFQISDLYWCT 502

  Fly    82 PPSGRFSYNECGLSCNALLTDDITHSVRCAQKV------LSQQGWSAWSTWH-YC 129
            ...|  ....|.:.||.||..|||..|:|.:.:      :|..|::||:.:: :|
  Fly   503 HNDG--GGKGCHIDCNRLLDSDITDDVKCVRTIHEEHTRISGDGFTAWTVYNGHC 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysENP_476827.2 LYZ_C_invert 19..139 CDD:381618 47/119 (39%)
CG8492NP_648151.2 LYZ_C_invert 18..144 CDD:381618
LYZ_C_invert 185..301 CDD:381618
LYZ_C_invert 439..566 CDD:381618 47/119 (39%)
LYZ_C_invert 596..723 CDD:381618
Herpes_BLLF1 <823..1261 CDD:282904
PHA03255 937..>1067 CDD:165513
Blue background indicates that the domain is not in the aligned region.

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