DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and Lyzl4

DIOPT Version :9

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001344275.2 Gene:Lyzl4 / 69032 MGIID:1916282 Length:145 Species:Mus musculus


Alignment Length:149 Identity:42/149 - (28%)
Similarity:74/149 - (49%) Gaps:17/149 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALACAAPAFGRT-MDRCSLAREMSNLGVPRDQ---LARWACIAEHESSYRTGVVGPE 61
            |:.::||:.::......|.: :.||::|:.:.:.|:...:   |..|.|:|..||.:....|..:
Mouse     1 MQLYLVLLLISYLLTPIGASILGRCTVAKMLYDGGLNYFEGYSLENWVCLAYFESKFNPSAVYED 65

  Fly    62 NYNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAWST 125
            ..:||..:|:|||.|..||.  .|:   |.|.:||.|||..::..:::||:|:: .:.|..||..
Mouse    66 PQDGSTGFGLFQIRDNEWCG--HGK---NLCSVSCTALLNPNLKDTIQCAKKIVKGKHGMGAWPI 125

  Fly   126 W-------HYCSGWLPSID 137
            |       .....||...|
Mouse   126 WSKNCQLSDVLDRWLDGCD 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 38/131 (29%)
Lyzl4NP_001344275.2 LYZ_C 21..143 CDD:340383 37/126 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844139
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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