DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysD and LysE

DIOPT Version :10

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_476827.2 Gene:LysE / 38128 FlyBaseID:FBgn0004428 Length:140 Species:Drosophila melanogaster


Alignment Length:140 Identity:135/140 - (96%)
Similarity:137/140 - (97%) Gaps:0/140 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALACAAPAFGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYNG 65
            |||||||||||.||||.|||:||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MKAFIVLVALAMAAPALGRTLDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYNG 65

  Fly    66 SNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTWHYCS 130
            ||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 SNDYGIFQINNYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTWHYCS 130

  Fly   131 GWLPSIDDCF 140
            |||||||.||
  Fly   131 GWLPSIDGCF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 117/119 (98%)
LysENP_476827.2 LYZ_C_invert 19..139 CDD:381618 117/119 (98%)

Return to query results.
Submit another query.