DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and LysX

DIOPT Version :10

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_523881.1 Gene:LysX / 38122 FlyBaseID:FBgn0004431 Length:142 Species:Drosophila melanogaster


Alignment Length:141 Identity:107/141 - (75%)
Similarity:119/141 - (84%) Gaps:1/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALACAAPA-FGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYN 64
            |:|.:.:..||...|| .|||||||||||||:|:||.||||::||||||||||||||||||.|.:
  Fly     1 MRALLGICVLALVTPAVLGRTMDRCSLAREMANMGVSRDQLSKWACIAEHESSYRTGVVGPPNTD 65

  Fly    65 GSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTWHYC 129
            ||||||||||||.|||.|.||:||:|.|.:||||||||||..|||||.|||.|||||||||||||
  Fly    66 GSNDYGIFQINDMYWCQPSSGKFSHNGCDVSCNALLTDDIKSSVRCALKVLGQQGWSAWSTWHYC 130

  Fly   130 SGWLPSIDDCF 140
            ||:||.|||||
  Fly   131 SGYLPPIDDCF 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 97/119 (82%)
LysXNP_523881.1 LYZ_C_invert 20..140 CDD:381618 97/119 (82%)

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