DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and Lyzl6

DIOPT Version :9

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001129305.2 Gene:Lyzl6 / 287751 RGDID:1306968 Length:149 Species:Rattus norvegicus


Alignment Length:143 Identity:49/143 - (34%)
Similarity:67/143 - (46%) Gaps:12/143 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALACAAPAFGRTMDRCSLAREM--SNL-GVPRDQLARWACIAEHESSYRTGVVGPEN 62
            |:...:.|.........|..::||:|||.:  .:| |.....|..|.|:|..||.:....| .||
  Rat     3 MRVLFICVVSCLLVVNDGSIINRCTLARILYQEDLDGFEGYSLPHWLCLAFVESKFNISKV-TEN 66

  Fly    63 YNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLS-QQGWSAWSTW 126
            .:|:.||||||||..|||...... |.|.|.|.|..||..::..|:.||:.::| ..|...|..|
  Rat    67 ADGTFDYGIFQINSRYWCNDYQSH-SENFCRLDCEELLNPNLIPSIHCAKMIVSGSGGMKNWVDW 130

  Fly   127 H-YCSG-----WL 133
            . :|.|     ||
  Rat   131 RLHCLGRPLSYWL 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 46/125 (37%)
Lyzl6NP_001129305.2 LYZ1 22..143 CDD:238066 44/122 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347515
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8912
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X173
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.960

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