DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and Lyz2

DIOPT Version :10

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_038934368.1 Gene:Lyz2 / 25211 RGDID:3026 Length:192 Species:Rattus norvegicus


Alignment Length:190 Identity:60/190 - (31%)
Similarity:81/190 - (42%) Gaps:60/190 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALACAAPAFGRTMDRCSLAREMSNLGVP---RDQLARWACIAEHESSYRTGVVGPEN 62
            |||.:||..|..:|....:|.:||..||.:...|:.   ...||.|.|:|:|||:|.|..   .|
  Rat     1 MKALLVLGFLLLSASVQAKTYERCEFARTLKRNGMSGYYGVSLADWVCLAQHESNYNTQA---RN 62

  Fly    63 YN---GSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNA-------------------------- 98
            ||   .|.||||||||..|||.......:.|.||:.|:|                          
  Rat    63 YNPGDQSTDYGIFQINSRYWCNDGKTPRAKNACGIPCSAVVTEKSSKHQQRRDILSLGTASIHLS 127

  Fly    99 ------------------LLTDDITHSVRCAQKVL-SQQGWSAWSTW-HYC-----SGWL 133
                              ||.||||.:::||::|: ..||..||..| .:|     ||::
  Rat   128 GSLWETLLRNVNPAVHTSLLQDDITQAIQCAKRVVRDPQGIRAWVAWQRHCKNRDLSGYI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 53/172 (31%)
Lyz2XP_038934368.1 LYZ1 19..191 CDD:197612 53/172 (31%)

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