DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and CG30062

DIOPT Version :10

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_725299.2 Gene:CG30062 / 246428 FlyBaseID:FBgn0050062 Length:171 Species:Drosophila melanogaster


Alignment Length:129 Identity:61/129 - (47%)
Similarity:87/129 - (67%) Gaps:3/129 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PAFGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQINDYYW 79
            |.....:..|.||.::..|.||:.:|..|.||||.||.:.|.|||..|.:||.|||:|||:|.||
  Fly    23 PLLAIRLQPCELAGQLYILDVPKSELPLWLCIAEFESRFNTHVVGQANADGSRDYGLFQISDRYW 87

  Fly    80 CAPPSGR--FSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTW-HYCSGWLPSIDDCF 140
            ||||:..  :::|:|.::|..||:||||.:|:||:.:..||||:|||.: .:|:|.|.:||.||
  Fly    88 CAPPNRTEYYAFNDCNVNCTHLLSDDITMAVQCARLIQKQQGWTAWSVYPEFCNGTLDAIDVCF 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 58/122 (48%)
CG30062NP_725299.2 LYZ_C_invert 29..150 CDD:381618 58/120 (48%)

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