DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and Lalba

DIOPT Version :9

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_034809.1 Gene:Lalba / 16770 MGIID:96742 Length:143 Species:Mus musculus


Alignment Length:135 Identity:49/135 - (36%)
Similarity:73/135 - (54%) Gaps:8/135 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALAC--AAPAFGRT-MDRCSLAREMSNL-GVPRDQLARWACIAEHESSYRTGVVGPE 61
            |..|:.|. |.|  :.|||..| :.:|.::..:.:: |.....|..|||:..|.|.|.|..|  .
Mouse     1 MMHFVPLF-LVCILSLPAFQATELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAV--V 62

  Fly    62 NYNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTW 126
            |.|||.:||:|||:|.:||.......|.|.||:||:.||.|::...:.||:|:|:.:|...|..:
Mouse    63 NDNGSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAIKGIDYWKAY 127

  Fly   127 H-YCS 130
            . .||
Mouse   128 KPMCS 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 41/115 (36%)
LalbaNP_034809.1 Lys 21..138 CDD:333808 41/114 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844187
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.810

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