DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and LOC100493166

DIOPT Version :9

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_031750467.1 Gene:LOC100493166 / 100493166 -ID:- Length:121 Species:Xenopus tropicalis


Alignment Length:123 Identity:40/123 - (32%)
Similarity:61/123 - (49%) Gaps:11/123 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLVALACAAPAFGRTMDRCSLAREMSN---LGVPRDQLARWACIAEHESSYRTGVVGPENYNGS 66
            :::||.|.|..::  .:|:||:.....|   .|:...:|..:.|:|.|.|.|.|.:     :...
 Frog     6 MIVVAAALAGNSW--ALDKCSVVEAFRNSGLAGIKGYKLEDFVCLAYHASRYDTSL-----HRSP 63

  Fly    67 NDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQ-QGWSAW 123
            .:|||||||.|:||.........|.|.:.|..||..||...|||.::::|. .|..||
 Frog    64 TEYGIFQINSYWWCDDGKTPGRKNWCRMPCTDLLDTDIEDDVRCVKRIVSDPNGLEAW 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 36/109 (33%)
LOC100493166XP_031750467.1 Lyz-like 20..121 CDD:412234 34/105 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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