DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysD and lyz

DIOPT Version :10

Sequence 1:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_002938553.2 Gene:lyz / 100492798 XenbaseID:XB-GENE-488433 Length:153 Species:Xenopus tropicalis


Alignment Length:132 Identity:52/132 - (39%)
Similarity:69/132 - (52%) Gaps:13/132 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GRTMDRCSLAREMSNLGVPRDQ---LARWACIAEHESSYRTGVVGPENYNGSNDYGIFQINDYYW 79
            |:..:||.||..|..:|:...:   |..|.|.|..|||:.|........:.|.||||.|||..:|
 Frog    19 GKLFERCELAGIMKKMGLDGYRGYSLPNWVCTAFFESSFYTDRTNFNRGDNSTDYGILQINSRWW 83

  Fly    80 CAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAWSTW-HYCSG-----WLPSID 137
            |.......|:|.|.::|.|||:||||.||.||::|: ..||..||..| ::|.|     |   |.
 Frog    84 CNDNKTPGSHNACNINCRALLSDDITQSVICAKRVVRDPQGMEAWVGWRNHCKGRDLSQW---IK 145

  Fly   138 DC 139
            ||
 Frog   146 DC 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 49/129 (38%)
lyzXP_002938553.2 LYZ_C 20..147 CDD:340383 49/129 (38%)

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