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Protein Alignment LysB and Lyc2
DIOPT Version :9
Sequence 1: | NP_001261245.1 |
Gene: | LysB / 38125 |
FlyBaseID: | FBgn0004425 |
Length: | 140 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001381322.1 |
Gene: | Lyc2 / 688047 |
RGDID: | 1593616 |
Length: | 148 |
Species: | Rattus norvegicus |
Alignment Length: | 146 |
Identity: | 58/146 - (39%) |
Similarity: | 80/146 - (54%) |
Gaps: | 16/146 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKAFIVLVALALAAPALGRTMDRCSLAREMSN---LGVPRDQLARWACIAEHESSYRTGVVGPEN 62
|||.:||..|.|:|....:....|.|||.:.: .|.....|..|.|:|:|||::.|..: |
Rat 1 MKALLVLGFLLLSASVQAKVFKHCELARILRSSALAGYRGVSLENWMCMAQHESNFDTEAI---N 62
Fly 63 YNG---SNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAW 123
||. |.||||||||..|||.......:.|.||:.|:|||.||||.:::||::|: ..||..||
Rat 63 YNSTDQSTDYGIFQINSRYWCNDGKTPRAVNACGIPCSALLQDDITQAIQCAKRVVRDPQGIRAW 127
Fly 124 STW-HYC-----SGWL 133
..| .:| ||::
Rat 128 VAWQRHCQNRDLSGYI 143
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LysB | NP_001261245.1 |
Lys |
19..139 |
CDD:278491 |
50/128 (39%) |
Lyc2 | NP_001381322.1 |
LYZ1 |
19..147 |
CDD:197612 |
50/128 (39%) |
Information from Original Tools:
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