DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysB and LOC4576754

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_001237085.2 Gene:LOC4576754 / 4576754 VectorBaseID:AGAMI1_000869 Length:144 Species:Anopheles gambiae


Alignment Length:143 Identity:51/143 - (35%)
Similarity:79/143 - (55%) Gaps:6/143 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIV-LVALALAAPALGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYN 64
            ||.|.| .:.||:.....|:..:||.|||.|:....|::||..|.|:.|:||.:.|..|.....|
Mosquito     1 MKLFFVSALLLAVLGSCSGKIYNRCELARLMAANRFPKEQLPDWMCLVEYESGFNTTAVRSVKKN 65

  Fly    65 GSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTW-HY 128
            .|..||:||:...|.|   :...:.|||.|.|::|:.|||:..:|||:.:..:..:::|..| :.
Mosquito    66 RSKYYGLFQLQSAYHC---NEWMAGNECHLKCSSLVNDDISDDMRCARSIYRRSFFNSWEGWRNN 127

  Fly   129 CSG-WLPSIDDCF 140
            |.| .||.:.:||
Mosquito   128 CQGKQLPGVAECF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 42/121 (35%)
LOC4576754XP_001237085.2 None

Return to query results.
Submit another query.