DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysB and LysX

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_523881.1 Gene:LysX / 38122 FlyBaseID:FBgn0004431 Length:142 Species:Drosophila melanogaster


Alignment Length:141 Identity:109/141 - (77%)
Similarity:121/141 - (85%) Gaps:1/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALALAAPA-LGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYN 64
            |:|.:.:..|||..|| ||||||||||||||:|:||.||||::||||||||||||||||||.|.:
  Fly     1 MRALLGICVLALVTPAVLGRTMDRCSLAREMANMGVSRDQLSKWACIAEHESSYRTGVVGPPNTD 65

  Fly    65 GSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTWHYC 129
            ||||||||||||.|||.|.||:||:|.|.:||||||||||..|||||.|||.|||||||||||||
  Fly    66 GSNDYGIFQINDMYWCQPSSGKFSHNGCDVSCNALLTDDIKSSVRCALKVLGQQGWSAWSTWHYC 130

  Fly   130 SGWLPSIDDCF 140
            ||:||.|||||
  Fly   131 SGYLPPIDDCF 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 97/119 (82%)
LysXNP_523881.1 LYZ_C_invert 20..140 CDD:381618 97/119 (82%)

Return to query results.
Submit another query.