DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysB and Lyzl1

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001102352.1 Gene:Lyzl1 / 364745 RGDID:1559869 Length:148 Species:Rattus norvegicus


Alignment Length:136 Identity:49/136 - (36%)
Similarity:75/136 - (55%) Gaps:17/136 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKA---FIVLVALALAAPALGRTMDRCSLAREMSNLGVPR---DQLARWACIAEHESSYRTGVVG 59
            |||   |.::::|.:.|.:  :...||.||:.....|:..   ..|..|.|:|.:||.|.|..  
  Rat     1 MKAVGVFALIMSLGIVAES--KVYTRCKLAKVFVKAGLDNYGGFTLGNWLCMAYYESHYNTSA-- 61

  Fly    60 PENY--NGSNDYGIFQINDYYWCAPPSG-RFSYNECGLSCNALLTDDITHSVRCAQKVLSQ-QGW 120
             |..  :||.||||||||.:.||.  :| :...|.|.::|:||.|||:|.::.||:|::.: ||.
  Rat    62 -ETVLEDGSTDYGIFQINSFTWCR--NGKKHQKNHCHVACSALTTDDLTDAILCAKKIVKETQGM 123

  Fly   121 SAWSTW 126
            :.|..|
  Rat   124 NYWQGW 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 43/115 (37%)
Lyzl1NP_001102352.1 LYZ_C 20..145 CDD:340383 43/115 (37%)

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