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Protein Alignment LysB and Spaca5
DIOPT Version :9
Sequence 1: | NP_001261245.1 |
Gene: | LysB / 38125 |
FlyBaseID: | FBgn0004425 |
Length: | 140 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001101528.1 |
Gene: | Spaca5 / 314431 |
RGDID: | 1584964 |
Length: | 160 |
Species: | Rattus norvegicus |
Alignment Length: | 147 |
Identity: | 48/147 - (32%) |
Similarity: | 76/147 - (51%) |
Gaps: | 20/147 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 IVLVALALAAPALGRTMDRCSLAREMSNLGVPRDQ---LARWACIAEHESSYRTGVVGPENYNGS 66
:|::|..|.|....:..:||.|||::...|:...: :..|.|:|.:||.:.|..| ..|.:||
Rat 8 VVILATLLLATVDAKIYERCELARKLEKAGLNGFKGYTVGDWLCVAHYESGFDTSFV-DHNPDGS 71
Fly 67 NDYGIFQINDYYWC----APPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAWSTW 126
::|||||:|..:|| .| :.|.|.:.||.||...|...:.||::|: |.:...||.:|
Rat 72 SEYGIFQLNSAWWCNNGITP-----TQNLCHMDCNDLLNRHILDDIMCAKRVVSSHKSMKAWDSW 131
Fly 127 -HYCSG-----WLPSID 137
.:|:| ||...|
Rat 132 TRHCAGHDLSEWLKGCD 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LysB | NP_001261245.1 |
Lys |
19..139 |
CDD:278491 |
44/133 (33%) |
Spaca5 | NP_001101528.1 |
LYZ_C |
22..147 |
CDD:340383 |
43/130 (33%) |
Information from Original Tools:
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