DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysB and Spaca5

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001101528.1 Gene:Spaca5 / 314431 RGDID:1584964 Length:160 Species:Rattus norvegicus


Alignment Length:147 Identity:48/147 - (32%)
Similarity:76/147 - (51%) Gaps:20/147 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLVALALAAPALGRTMDRCSLAREMSNLGVPRDQ---LARWACIAEHESSYRTGVVGPENYNGS 66
            :|::|..|.|....:..:||.|||::...|:...:   :..|.|:|.:||.:.|..| ..|.:||
  Rat     8 VVILATLLLATVDAKIYERCELARKLEKAGLNGFKGYTVGDWLCVAHYESGFDTSFV-DHNPDGS 71

  Fly    67 NDYGIFQINDYYWC----APPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAWSTW 126
            ::|||||:|..:||    .|     :.|.|.:.||.||...|...:.||::|: |.:...||.:|
  Rat    72 SEYGIFQLNSAWWCNNGITP-----TQNLCHMDCNDLLNRHILDDIMCAKRVVSSHKSMKAWDSW 131

  Fly   127 -HYCSG-----WLPSID 137
             .:|:|     ||...|
  Rat   132 TRHCAGHDLSEWLKGCD 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 44/133 (33%)
Spaca5NP_001101528.1 LYZ_C 22..147 CDD:340383 43/130 (33%)

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