DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysB and Lyzl6

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001129305.2 Gene:Lyzl6 / 287751 RGDID:1306968 Length:149 Species:Rattus norvegicus


Alignment Length:143 Identity:50/143 - (34%)
Similarity:68/143 - (47%) Gaps:12/143 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIVLVALALAAPALGRTMDRCSLAREM--SNL-GVPRDQLARWACIAEHESSYRTGVVGPEN 62
            |:...:.|...|.....|..::||:|||.:  .:| |.....|..|.|:|..||.:....| .||
  Rat     3 MRVLFICVVSCLLVVNDGSIINRCTLARILYQEDLDGFEGYSLPHWLCLAFVESKFNISKV-TEN 66

  Fly    63 YNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLS-QQGWSAWSTW 126
            .:|:.||||||||..|||...... |.|.|.|.|..||..::..|:.||:.::| ..|...|..|
  Rat    67 ADGTFDYGIFQINSRYWCNDYQSH-SENFCRLDCEELLNPNLIPSIHCAKMIVSGSGGMKNWVDW 130

  Fly   127 H-YCSG-----WL 133
            . :|.|     ||
  Rat   131 RLHCLGRPLSYWL 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 46/125 (37%)
Lyzl6NP_001129305.2 LYZ_C 22..146 CDD:340383 46/124 (37%)

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