DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysB and Spaca5

DIOPT Version :10

Sequence 1:NP_523882.1 Gene:LysB / 38125 FlyBaseID:FBgn0004425 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001078862.1 Gene:Spaca5 / 278203 MGIID:2685564 Length:160 Species:Mus musculus


Alignment Length:143 Identity:46/143 - (32%)
Similarity:75/143 - (52%) Gaps:20/143 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLVALALAAPALGRTMDRCSLAREMSNLGVPRDQ---LARWACIAEHESSYRTGVVGPENYNGS 66
            :|::|:.|.|....:..:||.||:::...|:...:   :..|.|:|.:||.:.|..| ..|.:||
Mouse     8 VVILAVLLIAKLDAKIYERCELAKKLEEAGLDGFKGYTVGDWLCVAHYESGFDTSFV-DHNPDGS 71

  Fly    67 NDYGIFQINDYYWC----APPSGRFSYNECGLSCNALLTDDITHSVRCAQKVL-SQQGWSAWSTW 126
            ::|||||:|..:||    .|     :.|.|.:.||.||...|...:.||::|. |.:...||.:|
Mouse    72 SEYGIFQLNSAWWCNNGITP-----TQNLCNIDCNDLLNRHILDDIICAKRVASSHKSMKAWDSW 131

  Fly   127 -HYCSG-----WL 133
             .:|:|     ||
Mouse   132 TQHCAGHDLSEWL 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysBNP_523882.1 LYZ_C_invert 19..139 CDD:381618 42/129 (33%)
Spaca5NP_001078862.1 LYZ_C 22..147 CDD:340383 42/129 (33%)

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