DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysX and Lyz2

DIOPT Version :10

Sequence 1:NP_523881.1 Gene:LysX / 38122 FlyBaseID:FBgn0004431 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_038934368.1 Gene:Lyz2 / 25211 RGDID:3026 Length:192 Species:Rattus norvegicus


Alignment Length:188 Identity:57/188 - (30%)
Similarity:80/188 - (42%) Gaps:55/188 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRALLGICVLALVTPAVLGRTMDRCSLAREMANMGVS---RDQLSKWACIAEHESSYRTGVVGPP 62
            |:|||.:..| |::.:|..:|.:||..||.:...|:|   ...|:.|.|:|:|||:|.|......
  Rat     1 MKALLVLGFL-LLSASVQAKTYERCEFARTLKRNGMSGYYGVSLADWVCLAQHESNYNTQARNYN 64

  Fly    63 NTDGSNDYGIFQINDMYWCQPSSGKFSHNGCDVSCNA---------------------------- 99
            ..|.|.||||||||..|||.......:.|.|.:.|:|                            
  Rat    65 PGDQSTDYGIFQINSRYWCNDGKTPRAKNACGIPCSAVVTEKSSKHQQRRDILSLGTASIHLSGS 129

  Fly   100 ----------------LLTDDIKSSVRCALKVL-GQQGWSAWSTW-HYC-----SGYL 134
                            ||.|||..:::||.:|: ..||..||..| .:|     |||:
  Rat   130 LWETLLRNVNPAVHTSLLQDDITQAIQCAKRVVRDPQGIRAWVAWQRHCKNRDLSGYI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysXNP_523881.1 LYZ_C_invert 20..140 CDD:381618 50/169 (30%)
Lyz2XP_038934368.1 LYZ1 19..191 CDD:197612 50/169 (30%)

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