DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trhn and Hn

DIOPT Version :10

Sequence 1:NP_612080.1 Gene:Trhn / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_523963.2 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster


Alignment Length:420 Identity:212/420 - (50%)
Similarity:282/420 - (67%) Gaps:16/420 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQRRLDQVVKMLNREVASVNYTSVN 154
            |.||..|.:|::..||::|:| |...:.....:..|:.:.....|.:.::.:..:.:..|..|.:
  Fly    46 GALANILAIFKKHDINLVHIE-SRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISRD 109

  Fly   155 TQGLARAPSLSACSSFDFGDMVWFPRKISDLDK-AQNVLMYGSELDADHPGFKDPVYRKRREQFS 218
            .:..|.|             :.||||:|.|||: |..:|.||||||||||||.||.|||||:.|:
  Fly   110 YKDNATA-------------VPWFPRRIRDLDRFANQILSYGSELDADHPGFTDPEYRKRRKYFA 161

  Fly   219 AIANNFKHGNPIPRVQYTPEEVKTWGTVFLELHRLYVLHAVPEYMDNWPELEKYCGYREDNVPQL 283
            .||.|:|||.|:|.|.||.||::|||.:|..|.:||..||..||...:|.|...||:||||:|||
  Fly   162 DIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQL 226

  Fly   284 QDVSVYLKRKTGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYIRHSSDPFYTPEPDCCHELLGHMP 348
            :|||.:|:..|||.||||||.||.||||:||||||||.||||||.|.|.||||||.||||:||:|
  Fly   227 EDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVP 291

  Fly   349 LLANSSFAQFSQEIGLASLGASDADIEKLATLYFFTVEFGLCKQADSTFKVYGAGLLSSVAELQH 413
            |.|:.:|||||||||||||||.|..||||:|:::||||:|:|:| :...|.||||||||..||::
  Fly   292 LFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQ-EGELKAYGAGLLSSYGELEY 355

  Fly   414 AITAENKIKKFDPEVTCQQECIITSYQNAYYYTDSFEEAKEQMRAFAESIQRPFGVRYNPYTMSV 478
            .:|.:.::|.|:||||...:..||.:|..||..||||.|||:...||.||.||||||||.||.||
  Fly   356 CLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKFANSIPRPFGVRYNAYTQSV 420

  Fly   479 EVLSNAKKITAVVSELRGDLSIVCSALRKI 508
            |||.:..:|:.::..:..:..|:.:|:.|:
  Fly   421 EVLDSKPQISNLMDNINSEFQILQNAVAKL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrhnNP_612080.1 Trp_5_monoox 34..509 CDD:130337 212/420 (50%)
HnNP_523963.2 Phe4hydrox_tetr 15..451 CDD:130335 212/420 (50%)

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