DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trhn and tph1a

DIOPT Version :10

Sequence 1:NP_612080.1 Gene:Trhn / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_840091.2 Gene:tph1a / 352943 ZFINID:ZDB-GENE-030317-1 Length:483 Species:Danio rerio


Alignment Length:444 Identity:253/444 - (56%)
Similarity:337/444 - (75%) Gaps:11/444 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QDNGRQHSPGERISIIFTLRNQVGNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQ 131
            :||..:.|...|.:::|:|:|:||.|.:||::|||..:|::|:|....:...::.::.||.:.::
Zfish    45 KDNKTESSETGRAAVVFSLKNEVGGLVKALKLFQENHVNLVHIESRKSKRRNSEFEIFVDCDSNR 109

  Fly   132 RRLDQVVKMLNREVASVNYTSVNTQGLARAPSLSACSSFDFGDMVWFPRKISDLDKAQN-VLMYG 195
            .:|.:::::|.:.|..|...:.:.    |.|..|     :..::.|||:|||||||..| |||||
Zfish   110 EQLHEIIQLLRKHVNVVEMDAPDN----RLPEES-----EMENVPWFPKKISDLDKCANRVLMYG 165

  Fly   196 SELDADHPGFKDPVYRKRREQFSAIANNFKHGNPIPRVQYTPEEVKTWGTVFLELHRLYVLHAVP 260
            |:||||||||||.||||||:.|:.:|.::|||:||||:::|.|||||||.||.||::||..||..
Zfish   166 SDLDADHPGFKDNVYRKRRKYFADLAMSYKHGDPIPRIEFTEEEVKTWGVVFRELNKLYPSHACR 230

  Fly   261 EYMDNWPELEKYCGYREDNVPQLQDVSVYLKRKTGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYI 325
            ||:.|.|.|.|:|..||||:|||:|||.:||.:|||.:|||||||||||||:||||||||||||:
Zfish   231 EYLKNLPLLIKHCDSREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYV 295

  Fly   326 RHSSDPFYTPEPDCCHELLGHMPLLANSSFAQFSQEIGLASLGASDADIEKLATLYFFTVEFGLC 390
            ||||||.||||||.|||||||:||||..||||||||||||||||||..|:||||.||||||||||
Zfish   296 RHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDDSIQKLATCYFFTVEFGLC 360

  Fly   391 KQADSTFKVYGAGLLSSVAELQHAITAENKIKKFDPEVTCQQECIITSYQNAYYYTDSFEEAKEQ 455
            || :...:.||||||||::||:||::...:|..|||.|||:||||||::|:.|:.:|||||||.:
Zfish   361 KQ-EGKLRAYGAGLLSSISELKHALSGNARILPFDPNVTCKQECIITTFQDVYFMSDSFEEAKVK 424

  Fly   456 MRAFAESIQRPFGVRYNPYTMSVEVLSNAKKITAVVSELRGDLSIVCSALRKIS 509
            ||.||::|:|||.|||||||.||:||.:...|..||.|||.:|.|:..||.:::
Zfish   425 MREFAKTIKRPFSVRYNPYTQSVDVLKDTTSINNVVEELRHELDIIGDALSRLN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrhnNP_612080.1 Trp_5_monoox 34..509 CDD:130337 253/442 (57%)
tph1aNP_840091.2 Trp_5_monoox 50..478 CDD:130337 251/437 (57%)

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