DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trhn and tph1

DIOPT Version :10

Sequence 1:NP_612080.1 Gene:Trhn / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_031756189.1 Gene:tph1 / 100497239 XenbaseID:XB-GENE-996926 Length:180 Species:Xenopus tropicalis


Alignment Length:113 Identity:30/113 - (26%)
Similarity:65/113 - (57%) Gaps:9/113 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RISIIFTLRNQVGNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQRRLDQVVKMLN 142
            :.|:||:|:|::|.|.:||::|||..:|::|:|....:...::.::.||.:.::.:|:::..:|.
 Frog    55 KASVIFSLKNEIGGLVKALKLFQEKHVNLIHIESRKSKRRNSEFEIFVDCDSNREQLNEIFHLLK 119

  Fly   143 REVASVNYT-----SVNTQGLARAPSLSACSSFDFGDMVW-FPRKISD 184
            ..|:.::.:     ||...|..:...::|.   .||.:|. |..|:.|
 Frog   120 PHVSVISMSPPENFSVEEDGKNKGYRVTAP---PFGLLVSPFSAKLVD 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrhnNP_612080.1 Trp_5_monoox 34..509 CDD:130337 30/113 (27%)
tph1XP_031756189.1 ACT_TPH 56..129 CDD:153201 20/72 (28%)

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