DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trhn and tph2

DIOPT Version :10

Sequence 1:NP_612080.1 Gene:Trhn / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_002940217.3 Gene:tph2 / 100486097 XenbaseID:XB-GENE-958329 Length:485 Species:Xenopus tropicalis


Alignment Length:436 Identity:247/436 - (56%)
Similarity:331/436 - (75%) Gaps:15/436 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ERISIIFTLRNQVGNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQRRLDQVVKML 141
            ||.::|.|::|:||.|.:.|::|:|..:|::|:|....:...::.|:.|:.||.:::..::..:|
 Frog    57 ERTAVILTMKNEVGGLLQNLKIFKEKYVNIIHIESRKSKGNKSEVDMYVEFECTKKKCQELQHLL 121

  Fly   142 NRE--VASVNYTSVNTQGLARAPSLSACSSFDFGDMVWFPRKISDLDKAQN-VLMYGSELDADHP 203
            ..:  :.|||    ..:.:.|...       :...::|||||||:|||..| |||||||||||||
 Frog   122 KLQSGIISVN----PVERIWRKDE-------ELEGVLWFPRKISELDKCSNRVLMYGSELDADHP 175

  Fly   204 GFKDPVYRKRREQFSAIANNFKHGNPIPRVQYTPEEVKTWGTVFLELHRLYVLHAVPEYMDNWPE 268
            ||||.|||:||:.|..:|.::|:|.|||||:||.||:|||||||.||.:||..||..||:.|.|.
 Frog   176 GFKDNVYRQRRKYFVDVAMDYKYGQPIPRVEYTAEEIKTWGTVFKELTKLYPTHACKEYLKNLPL 240

  Fly   269 LEKYCGYREDNVPQLQDVSVYLKRKTGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYIRHSSDPFY 333
            |.|||||||||||||:||:::||.::||.:|||||||||||||:|||:|||||||||||.|||.|
 Frog   241 LTKYCGYREDNVPQLEDVAIFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYIRHGSDPLY 305

  Fly   334 TPEPDCCHELLGHMPLLANSSFAQFSQEIGLASLGASDADIEKLATLYFFTVEFGLCKQADSTFK 398
            |||||.|||||||:||||:..|||||||||||||||||.|::||||.||||:||||||| |...:
 Frog   306 TPEPDTCHELLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQ-DGQLR 369

  Fly   399 VYGAGLLSSVAELQHAITAENKIKKFDPEVTCQQECIITSYQNAYYYTDSFEEAKEQMRAFAESI 463
            .||||||||:.||:||::.:..:|.|||:.||.||||||::|::|:.::||:||||:||.||:||
 Frog   370 AYGAGLLSSIGELKHALSDKAIVKTFDPKTTCLQECIITTFQDSYFVSESFDEAKEKMREFAKSI 434

  Fly   464 QRPFGVRYNPYTMSVEVLSNAKKITAVVSELRGDLSIVCSALRKIS 509
            .|||.|.:||||.|:|:|:|.:.|..|:.:||.||:.|..||.|::
 Frog   435 NRPFSVYFNPYTQSIEILNNTRSIENVIQDLRSDLNTVSDALAKMN 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrhnNP_612080.1 Trp_5_monoox 34..509 CDD:130337 247/434 (57%)
tph2XP_002940217.3 ACT 59..132 CDD:471857 20/76 (26%)
Biopterin_H 148..476 CDD:459776 221/328 (67%)

Return to query results.
Submit another query.