DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and zbtb43

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001072352.1 Gene:zbtb43 / 779805 XenbaseID:XB-GENE-5880504 Length:465 Species:Xenopus tropicalis


Alignment Length:386 Identity:81/386 - (20%)
Similarity:143/386 - (37%) Gaps:80/386 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYF--QTLLAET 159
            :.|..|.:.:.|:.:.:....:|..|.....|:::...|...:|||.||:|.||||  |.||..:
 Frog     3 AGSGAFRVEFPNFSSTILAKLNQQRQLGQLCDISVVVQGHLFRAHKAVLAASSPYFCDQVLLKNS 67

  Fly   160 PCQHPIVIMRDV-NWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLAD-VTHMEAATAA 222
                ..|::.|| |....:.|:...|.|.:::...:|...|..|..|::..:.| .|.:......
 Frog    68 ----RRVVLPDVMNPRVFENILLSSYTGRLSLPAHEIVSYLTAASFLQMWHVVDKCTELLEGNPT 128

  Fly   223 -----AAAASSERMPSSPKESTSTSRTE---------------HDREREAE-----ELLAFMQPE 262
                 |.|.|..:.|||...::.:...|               .|.|.|.|     ||.:.:...
 Frog   129 LLCQKANAGSDHQSPSSSNYNSLSEGFELGAVGPVDFRKGEEMRDVENEVESPKDDELSSQLTEH 193

  Fly   263 KKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERER 327
            :.|.::.....:...:.|..|.|..|..   .||:..:..|....|  |:::.:|. :..|....
 Frog   194 EYLPSNSSTEHDQLSTELTSQDGEEVAS---DSAEYHYTRPIYMKP--SIMSHKRW-IHVKPERF 252

  Fly   328 QRDC---------------SLMTPPPKPPMSSGSTVGATRRLETAIHALDM----PSPAATPGPL 373
            :::|               |:...|.:|.:.| |.:|.|         .|:    |......|.:
 Frog   253 EQECEGMEAHPTFEDHISESINAGPLEPQIQS-SGIGDT---------FDLCGKKPGDLEGHGKV 307

  Fly   374 SRSSRP---HSQSPQQQQAQQQGQLPLPLPLHPHHHASP-APHPS--QTAGSAHHPASPAG 428
            :|....   :..|.::..|::...      |..|...:| ||:..  :.|.......||:|
 Frog   308 TRYDEQVDFYGASMEEFTAERDDH------LDAHGVENPSAPYGEGIEVAAGIKEETSPSG 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 26/85 (31%)
HTH_psq 569..614 CDD:283007
zbtb43NP_001072352.1 BTB_POZ_ZBTB43 8..128 CDD:349536 32/123 (26%)
C2H2 Zn finger 374..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
zf-H2C2_2 412..435 CDD:463886
C2H2 Zn finger 428..445 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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