DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and CG34376

DIOPT Version :9

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:839 Identity:195/839 - (23%)
Similarity:294/839 - (35%) Gaps:261/839 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 QFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPI 165
            :|.|.|.|:|.|:.:.|..|......|||||||||:.:.|||:||:.||||||.:....||:|||
  Fly     4 EFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCKHPI 68

  Fly   166 VIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSER 230
            :|::||:::.:..::||||:|.:||...::...::|.::|:::|||  |:..::..::.:..|..
  Fly    69 IILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLA--TNSNSSPGSSVSEKSSS 131

  Fly   231 MPSSPKESTSTSRTEH----------------DREREAEELLAFMQPEKKLRTSDWDPAELRLSP 279
            .|.: :||::|:.|.|                ..|.:.:.......|....|.|: |.:.|..| 
  Fly   132 QPPA-EESSNTNSTNHHNSSTNSNNNSKSETDHNESKGQSNSRTTSPGGASRASN-DASHLYTS- 193

  Fly   280 LERQQGRNVRKRRWPS---ADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPP 341
                     .||..||   :|::           |:.:.:::....|:..               
  Fly   194 ---------NKRPMPSDFGSDSL-----------SIYSGKQLRRSLKDHG--------------- 223

  Fly   342 MSSGSTVGATRRLETAIHALD----------MPSPAATPGPLSRSSRPHSQSPQQQQAQQQGQLP 396
             |.||..|.....:||. .||          .|.|..|.|               :|....|.|.
  Fly   224 -SGGSEGGGGDHADTAA-GLDNSMNSEEFFLPPIPQITMG---------------EQRYDLGGLK 271

  Fly   397 LPLPLHPHHHASPAPHPSQTAGSAHHPASPAGDSRFPLGPAAAMAAARELSGLGPGPSAEPRLPP 461
            .....|.|...|.....|.:.||....|||:...|.|..|....:......|...|||..     
  Fly   272 RESDGHHHGPLSAGGGNSGSVGSLTSSASPSAPIRNPFAPNFMDSFNYYKGGNSSGPSGS----- 331

  Fly   462 PPPHHHGGGGVGGGGVGGGGAGGVGSGGGSSLADDLEIKPGIAEMIREEERAKMMENSHAWMGAT 526
                  ....||.|||...|:.|:|||..         .|.  |:....:.:|...| |..:.::
  Fly   332 ------SNNSVGPGGVNNNGSVGLGSGAE---------YPN--ELYMPNDYSKSFAN-HMDIPSS 378

  Fly   527 GSTLAADSYQYQLQSMWQKC-WNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQA 590
            ||.:...|....|..   .| :|.|..:......:.....||:|               :|:.:|
  Fly   379 GSNMVMLSTTSLLHG---NCVFNRNNTVATQQGMKTYWLCKSYR---------------ISMCRA 425

  Fly   591 ARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDT 655
            .   .|.:...::.|..|||.. |.:.||     :|...|                         
  Fly   426 R---CITHLGRIISATGVHNHT-PHMRGG-----QGSSAP------------------------- 456

  Fly   656 KDIKDESLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGAPSSMACPNGSGPQTGVGVA-GEQH 719
                                             ::.:::|.|:    |.....|.|..:. |..|
  Fly   457 ---------------------------------STASVSGNPA----PTPISSQAGYSLTDGGGH 484

  Fly   720 MSQETAAAVAAVAHNIRQQMQMA-AVPPGLFNLPPHPGVGGGVGNVPGAAGGRASISPALSSGSG 783
            :..:       :.|..|.....| ..||     ||.|                   .|.|...|.
  Fly   485 LGPD-------LQHGNRVTNMFANQTPP-----PPPP-------------------PPPLPVAST 518

  Fly   784 PRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAHHHMQQ-------LH---LQQQQAHLHHHQQ 838
            |.|..........||||     :..||     .|..||:|       ||   |...|...|||||
  Fly   519 PHHPHHHHHLGQPLPNL-----LVQHH-----PAPSHMEQHGSSASLLHNPNLMHLQTPTHHHQQ 573

  Fly   839 QQQQQQQQHH-----QGGHQVAHKSGFGASSSSSA----SSSSMGQHHAPKAKSSPLRS 888
            |..||...|:     |...::...||.||...|.|    |..|....|:.:|:|.|.:|
  Fly   574 QHHQQHSPHNPPPPQQHNLELGGGSGSGAVLLSPAHLQQSPQSNRSSHSLQAQSPPPQS 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB 117..216 CDD:279045 43/98 (44%)
BTB 128..213 CDD:197585 39/84 (46%)
HTH_psq 569..614 CDD:283007 8/44 (18%)
CG34376NP_732741.1 BTB 20..113 CDD:279045 39/92 (42%)
BTB 31..115 CDD:197585 39/85 (46%)
FLYWCH 390..443 CDD:282369 13/73 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447066
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 80 1.000 Inparanoid score I5230
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.990

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