DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and CG6765

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_648233.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster


Alignment Length:930 Identity:185/930 - (19%)
Similarity:288/930 - (30%) Gaps:322/930 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRS-----------MKAHKMVLSACSPY 151
            :::.:.|:|:::.|.|.:....|.:||.|.||.|.....|           :.|||.:|||.|.:
  Fly     2 AAENYHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQF 66

  Fly   152 FQTLLAETPCQHP-----IVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLA 211
            |.|:....|..:|     :|:..|::...::.:|::||.||..||.|.:..:||..|:||:||| 
  Fly    67 FATMFETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGL- 130

  Fly   212 DVTHMEAATAAAAAASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELR 276
                  ..|:::....|..:.::.....|.:...|.||...      |......||:        
  Fly   131 ------CRTSSSNGGGSGSVVTTTHHPHSLAGHLHPREAST------MYMSNGTRTA-------- 175

  Fly   277 LSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPP 341
                                    .||.||.|.|::.|           :.|.|.....|     
  Fly   176 ------------------------LPPPPPPPQSTMSA-----------QLQGDLYASKP----- 200

  Fly   342 MSSGSTVGATRRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQAQQQGQLPLPLPLHPHHH 406
                   |.:.|.....|.|.           |..|..:..:| |||.:..|...:|        
  Fly   201 -------GGSTRFALDHHHLS-----------SHHSHLNHHNP-QQQFRGLGASVMP-------- 238

  Fly   407 ASPAPHPSQTAGSAHHPA--SPAGDSRFPLGPAAAMAAARE--LSGLGPGPSAEPRLPPPPPHHH 467
             ..:|...::...|.|..  :.|..|:..:.....:|...|  .....||.......||||....
  Fly   239 -KDSPVIIKSPKLAAHTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTT 302

  Fly   468 GGGGVGGGGVGGGGAGGVGSGGGSSLADDLEIKPGIAEMIREEERAKMMENSHAWMGATGSTLAA 532
            ...|.|||.|||.||                 .|.....|..|            :|.:...|.|
  Fly   303 TTVGGGGGSVGGSGA-----------------PPSQPISICTE------------VGCSSCPLTA 338

  Fly   533 DSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPL-----KSWRPETMAEAIFSVLKEGLSLSQAAR 592
            .....|.::..::.....|.|      |||..:     :..|.|:..|             ::..
  Fly   339 GPGADQAETTLRRTEYEEQAL------RERNEVGLVFERRLRRESACE-------------RSRD 384

  Fly   593 KYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKD 657
            .|:.|:...|: ::|:.....|.....|...|.....|...|                      .
  Fly   385 YYEAPHFEHVV-SSRLAATPPPPPQQAPPSHPPTLRHPHNFL----------------------T 426

  Fly   658 IKDESLA-AHMPPYGRH-SPAFPLQDLPLSYPG-----ASGAL-------AGAPSSMACPNGSGP 708
            ||.|... ::.||.... |....|::|||:.|.     ...|:       .|.||.         
  Fly   427 IKQEPTDWSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKLEVNRDRGTPSE--------- 482

  Fly   709 QTGVGVAGEQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLF--------NLPPHPG--VGGGVGN 763
                  ..|:|..::         :|..:|:.:..:....|        :|..|.|  .||...|
  Fly   483 ------ESEEHTLRD---------YNNFKQLLVCEICQKSFEDTKMLVRHLGTHAGDPTGGTERN 532

  Fly   764 V--PGAAGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAH-------- 818
            :  ..|:|...|.|..|:..|...:.|.......               ||:....|        
  Fly   533 LLPSSASGSTTSASSNLALRSVKTYVPKKRRRVS---------------QQENNMDHDHVTLLCD 582

  Fly   819 -------------HHMQQLHLQQQQAHLHHHQQQQQQQQQQHHQGGHQVAHKSGFGASSSSSASS 870
                         .||...|.:.:.|..:..:..:|:.||.....          ..||||:.|:
  Fly   583 LCSTSFDTPAEWVRHMNSQHTEIELAMFNSKKDGEQKGQQPPPPP----------ATSSSSTVSN 637

  Fly   871 SSMGQHHAPKAKSSPLRSETPRLHSPLGDLGLDMASYKREFSPSRLFAEDLAELVGASVSSSSSS 935
            |.|    .||..||   :.|...||        :..:|                      .|:|.
  Fly   638 SQM----QPKYPSS---TATRSTHS--------LMLHK----------------------MSNSD 665

  Fly   936 AAAATAPPERSAGAASAATG 955
            |.|.|..|    ||:::..|
  Fly   666 AVATTTSP----GASTSPNG 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 31/98 (32%)
HTH_psq 569..614 CDD:283007 7/44 (16%)
CG6765NP_648233.1 BTB_POZ 53..129 CDD:453885 26/75 (35%)

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