DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and CG8924

DIOPT Version :9

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:515 Identity:131/515 - (25%)
Similarity:207/515 - (40%) Gaps:188/515 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SSSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETP 160
            |.::|:||:|||::..::...|.|||..:.||||||||:|:.:..|::||:|||.||:.:|||.|
  Fly     2 SGATQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHP 66

  Fly   161 CQHPIVIM-RDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGL----ADVTH----- 215
            |:||::|: |::...:::|:|:|||:||:||:|..:|.|||.||.|::|||    |.:.:     
  Fly    67 CKHPVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSEAPINYKKLQQ 131

  Fly   216 --MEAATAAAAAA--------SSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDW 270
              :|||...||..        |:|...::...:|||:.|    ...|..|....|....|:..:.
  Fly   132 ASLEAAKDPAATTARSFKHVDSAETDDAATNSTTSTTMT----TSSAPPLPVNHQQPTVLKRQNP 192

  Fly   271 DPAELRLSPLERQQGRNVRKR--------RWPSADTIFN-----PPAPPSP-------------- 308
            |..:.:    ::||.:.|::|        :.||..|..|     ..||...              
  Fly   193 DARQQQ----QQQQQQQVQQRPQINGSNAQQPSKATSTNVLGSHSNAPTEDDSGDEVPNNWNAYG 253

  Fly   309 --------------------LSSLIAAERMELEQKE---------------RERQRDCSLMTPPP 338
                                ||...|..:|:|:|::               .:...|.|..|..|
  Fly   254 EQFDDCNISAQAVDNKMNVHLSLQQARMQMQLQQQQYLDSNVEDDHNYVAAHDENNDSSFATGVP 318

  Fly   339 KPPMSSGSTVGATRRLETAIHALDMPSPAATPGPLSRSSRP---------HSQSPQQQQAQ---- 390
                 .||  |.:..|:|     |:.:.|.|.|.||.||..         .|::...|.|:    
  Fly   319 -----CGS--GLSLSLDT-----DLDTSANTSGGLSHSSIDGYTSYKRVRRSEASLAQAAKCVSK 371

  Fly   391 -----------------------QQGQLP-------------------------LPL-----PLH 402
                                   ::|.||                         :|.     |.|
  Fly   372 GETFQTVSNMFNIPVSTIRFYMARKGILPKRKRGRGASHAGNIIITTNSGKLSTVPASITHPPAH 436

  Fly   403 PHHHASPAPHP----------------SQTAGSAHHPASPAGDSRFPLGPAAAMAAAREL 446
            ||.|.:|.||.                :.|:||    .|||..:...:.|:..||...::
  Fly   437 PHIHTNPLPHTQSQQMSMDSLHLKAGIANTSGS----NSPATATATSMSPSFDMATTGDI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB 117..216 CDD:279045 51/110 (46%)
BTB 128..213 CDD:197585 45/89 (51%)
HTH_psq 569..614 CDD:283007
CG8924NP_573091.1 BTB 25..117 CDD:279045 47/91 (52%)
BTB 34..117 CDD:197585 42/82 (51%)
MerR 378..407 CDD:278788 3/28 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447070
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.030

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