DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and CG32121

DIOPT Version :9

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:468 Identity:121/468 - (25%)
Similarity:187/468 - (39%) Gaps:125/468 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SSSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLL-AET 159
            :.|.|||||||:|:||:|.:....||......|||::.:||.::||::||||||.:|..:. |..
  Fly    24 NDSQQQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALE 88

  Fly   160 PCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAA 224
            ...||::|:...::..:.:::.|||.||:||.::||..||.:||.|.::|||||.:......|.:
  Fly    89 ASNHPVIIIPGASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARS 153

  Fly   225 AASS------------ERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRT-------SDW 270
            ...|            || |::|..:.:.:.|.......:..|.....|...|.|       ...
  Fly   154 GGGSYMDTTNEKSSEFER-PTTPSPTPTPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSV 217

  Fly   271 DPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPL----------SSLIAAERMELE---- 321
            :.:.:..:|||     |:.|      ...|.|...|.||          :.|:|..:.:.:    
  Fly   218 NSSGMGTTPLE-----NLFK------SLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQS 271

  Fly   322 -QKERERQRDC------SLMTPPP----------KPPMSSGSTVGATRRLETAIHALDMPSP--A 367
             .:|.:.:.||      ...:||.          |.|.||.:|..::.:   :......|:|  |
  Fly   272 GMQEDQLETDCFGSKRLKGDSPPKELRRLEKSLLKNPKSSSTTNSSSSK---SPQECSNPNPIVA 333

  Fly   368 ATPGPLSRSSRPHSQSPQ----------QQQAQQQGQLPLPLPLHPHHHASPAPHPSQTAGSAHH 422
            .:|..|:..:..|. |||          ...|..||||....|  |.:.|:..|..:|.|...||
  Fly   334 TSPVTLAPPTMAHF-SPQLPVVKCSSASYPSALGQGQLYSSKP--PLYSAAVTPTAAQQAAQMHH 395

  Fly   423 PASPAGDSRFPLGPA---------------------AAMAAARELSGLG-PGPSAEPRL------ 459
            ...|        ||:                     ||.|||....|:. ....:||.|      
  Fly   396 HPQP--------GPSPYISAEDHAKLQLHIEQYQREAAAAAAAAAGGMALVSAKSEPNLLSLSAD 452

  Fly   460 --------PPPPP 464
                    |..||
  Fly   453 RDKSLATAPIKPP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB 117..216 CDD:279045 39/99 (39%)
BTB 128..213 CDD:197585 35/85 (41%)
HTH_psq 569..614 CDD:283007
CG32121NP_001097599.1 BTB 48..142 CDD:279045 37/93 (40%)
BTB 56..149 CDD:197585 37/92 (40%)
C2H2 Zn finger 474..494 CDD:275370
C2H2 Zn finger 501..518 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447069
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.940

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