DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bab1 and zbtb14

DIOPT Version :10

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:XP_002938096.1 Gene:zbtb14 / 100487514 XenbaseID:XB-GENE-968315 Length:452 Species:Xenopus tropicalis


Alignment Length:258 Identity:59/258 - (22%)
Similarity:102/258 - (39%) Gaps:60/258 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDL- 176
            |.|:.:|.|:.| |.|:.:..:....:||:.||:|||.||:.|..:.......||..|...||: 
 Frog    23 LKTLNEQRLEGE-FCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIF 86

  Fly   177 KAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTS- 240
            :.::.:||..:|.|.::.:..::...::|.:|.|.     :..:.....:|.:..|:|||...| 
 Frog    87 EEVLNYMYTAKIAVKKEDVNLMMSSGQILGIRFLD-----KLCSQKRDVSSIDENPASPKNKYSY 146

  Fly   241 ---------TSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSA 296
                     ......:::.|.||:            .|.|.:                    ||.
 Frog   147 ETSLKITRPVGEANDNQDDEVEEI------------GDQDDS--------------------PSD 179

  Fly   297 DTIFNPP----APPSPLSSLIAAERMELE-QKERERQRDC------SLMTPPPKPPMSSGSTV 348
            ||:...|    ...||.|:|...|.:..| ..|..|:.:|      ::.|..||...|...|:
 Frog   180 DTVEGTPQSHEEEKSPTSTLRVQEAILKELGSEEVRKVNCYGQEVEAMETTEPKDLGSQTQTL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB_POZ_BAB-like 126..209 CDD:349624 22/83 (27%)
HTH_psq 569..614 CDD:283007
zbtb14XP_002938096.1 BTB_POZ_ZBTB14 18..131 CDD:349513 29/113 (26%)
C2H2 Zn finger 281..301 CDD:275368
SFP1 <305..385 CDD:227516
C2H2 Zn finger 309..329 CDD:275368
C2H2 Zn finger 337..357 CDD:275368
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..409 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.