DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab1 and Btbd18

DIOPT Version :9

Sequence 1:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:369 Identity:89/369 - (24%)
Similarity:145/369 - (39%) Gaps:83/369 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 VASPSSSSQQFCLRWNNYQTNLTTIFDQL---LQNECFVDVTLACDGRSMKAHKMVLSACSPYF- 152
            :.||:||.    :.:.|.:. |...|.||   .|:..|.|..|..:|.::.||..:||||||:| 
Mouse     1 MCSPASSK----ILYRNPRF-LRVAFLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFT 60

  Fly   153 QTLLAETPCQHPIVI--MRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADV-- 213
            :.|..|.|.|...|:  |..:....|:.:|:|:|..|:.|||::...:|..|..|:|..|..:  
Mouse    61 ERLERERPVQGRKVVLEMGGLKIQTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSELETLQL 125

  Fly   214 -------------THMEAATAAAAAASSERM------PSSPKESTST----------SRTEHDRE 249
                         .:.|.....|||..|.|:      |.:|...|.|          |..|.:..
Mouse   126 EGGKLVKAPQGRRLNRECLQPPAAAPISARVVGPKSRPQTPLPVTQTPSPLGAVRLKSLGEEEGA 190

  Fly   250 REAEEL-----LAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPL 309
            .:...|     |:..|.:||.|..  ...|.|.||..:::|         ..:|..||  .|:.|
Mouse   191 HKKTNLPNADSLSDTQLKKKARVC--LTQESRSSPSSQREG---------PKETKSNP--GPTAL 242

  Fly   310 SSLIAAERMELEQKERERQRD-----------CSLMTPPPKPPMSSGSTVGATRRLETAIHALDM 363
            .||..:...:|..::....|.           .|:::.|...|.:.|..:...|.:......:|.
Mouse   243 PSLYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPSSMPTAPGRRLWRQRTVSKEAQGVDK 307

  Fly   364 PSPA------ATPGP--LSRSSRPHSQSPQ----QQQAQQQGQL 395
            ..|.      :||.|  :.:.:....|||:    ...:.::||:
Mouse   308 QKPGEVRPLQSTPDPSDVGKPAENKKQSPELRAPTSSSVEEGQV 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab1NP_728565.1 BTB 117..216 CDD:279045 36/119 (30%)
BTB 128..213 CDD:197585 31/87 (36%)
HTH_psq 569..614 CDD:283007
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 36/117 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 7/25 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 33/174 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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