DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and ITR2

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:532 Identity:149/532 - (28%)
Similarity:247/532 - (46%) Gaps:70/532 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFLTYSIFSAVLGMLQFGYNTGVINAP----EKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVS 71
            |.:|.:..:::.|.: |||:||.|::.    .::::|.:.     .|||       ::|.:.|.|
Yeast   108 FIITLTFVASISGFM-FGYDTGYISSALISINRDLDNKVL-----TYGE-------KELITAATS 159

  Fly    72 IFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGL 136
               :|.::.....|..|:.|||:..|:.:|::.:.||.|.   ..:|.:..:..||.|:|...|:
Yeast   160 ---LGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQ---ITAHKFWQMAAGRLIMGFGVGI 218

  Fly   137 NTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTN---EGWPILLGLAICPA 198
            .:.:.|::||||||..:||.|..:|.|.:|.|.|::...|    .|.|   .||.||:||::.|.
Yeast   219 GSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCG----AGLNHVKNGWRILVGLSLIPT 279

  Fly   199 ILQLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSES------- 256
            :||.......|::||| .:.|...:.|:..|:  |:..:.|::|.:.:.||.:..::|       
Yeast   280 VLQFSFFCFLPDTPRY-YVMKGDLKRAKMVLK--RSYVNTEDEIIDQKVEELSSLNQSIPGKNPI 341

  Fly   257 ---HISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGA 318
               .....||...|:....||||..:|..|||:|.|::.|:|.::|.:.|....||  .:|.:..
Yeast   342 TKFWNMVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSA--VSIIVSG 404

  Fly   319 IMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLSVVATLGF----- 378
            ...|.||::...:|:.|||.:.|.||.||.:..:...|:|.... |.:....:|||:.||     
Yeast   405 TNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLG-IKFNGADAVVASDGFSSWGI 468

  Fly   379 ---------VVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALEN 434
                     ..|:|:|.|::||. .:|||.|..|....:.|...||..:.|:...|.:|   |:|
Yeast   469 VIIVFIIVYAAFYALGIGTVPWQ-QSELFPQNVRGVGTSYATATNWAGSLVIASTFLTM---LQN 529

  Fly   435 Y----TFLPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRHNNGRSMLNCTNSLEPQSMNSGIE 495
            .    ||..|:....:..||.|...||......||:..:.:................|.:..|..
Yeast   530 ITPTGTFSFFAGVACLSTIFCYFCYPELSGLELEEVQTILKDGFNIKASKALAKKRKQQVAEGAA 594

  Fly   496 HAALMVSEEKTQ 507
            |..|..  |.||
Yeast   595 HHKLKF--EPTQ 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 135/469 (29%)
Sugar_tr 18..470 CDD:278511 140/486 (29%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 136/473 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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