DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and ITR1

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:496 Identity:142/496 - (28%)
Similarity:237/496 - (47%) Gaps:68/496 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFI----QQLYSVAVS 71
            |.:|.:..:::.|.: |||:||.|::...:|            |.|:..:.:    :::.:.|.|
Yeast    85 FIITLTFVASISGFM-FGYDTGYISSALISI------------GTDLDHKVLTYGEKEIVTAATS 136

  Fly    72 IFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVS-HSYEMLFLGRFIIGVNCG 135
               :|.::.....|..|:.||||..|:.:|::.:.||.|    :|| |::..:.:||.|:|...|
Yeast   137 ---LGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAIL----QVSAHTFWQMAVGRLIMGFGVG 194

  Fly   136 LNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAIL 200
            :.:.:.|::||||||..:||.|..:|.|.:|.|.|::...| ..:...|.||.||:||::.|..:
Yeast   195 IGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCG-AGLNYVNNGWRILVGLSLIPTAV 258

  Fly   201 QLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSES--------- 256
            |...|...|::||| .:.|.....|.:.|:|.....|  |:|.|.:.||....::|         
Yeast   259 QFTCLCFLPDTPRY-YVMKGDLARATEVLKRSYTDTS--EEIIERKVEELVTLNQSIPGKNVPEK 320

  Fly   257 -HISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIM 320
             ..:..||...|:....||||..:|..|||:|.|::.|:|.::|.:.|....||  .:|.:....
Yeast   321 VWNTIKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSA--VSIIVSGTN 383

  Fly   321 VVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISF-------------LIKEMIDWMSYLSV 372
            .:.|||:...:|:.||||:.|.||.||.:..:..:|:|             ::.........:.:
Yeast   384 FIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVII 448

  Fly   373 VATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENYT- 436
            |..:.|..|:|:|.|::||. .:|||.|..|....:.|...||..:.|:...|.:|   |:|.| 
Yeast   449 VFIIVFAAFYALGIGTVPWQ-QSELFPQNVRGIGTSYATATNWAGSLVIASTFLTM---LQNITP 509

  Fly   437 ------FLPFSVFLAIFWIFTYKKVPETKNKTFEEILALFR 471
                  |...|....||..|.|   ||......||:..:.:
Yeast   510 AGTFAFFAGLSCLSTIFCYFCY---PELSGLELEEVQTILK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 135/469 (29%)
Sugar_tr 18..470 CDD:278511 140/486 (29%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 136/473 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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