DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and CIN10

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_010675.3 Gene:CIN10 / 851995 SGDID:S000002795 Length:555 Species:Saccharomyces cerevisiae


Alignment Length:549 Identity:138/549 - (25%)
Similarity:227/549 - (41%) Gaps:121/549 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LTFFLTYSIFSAVLGMLQFGYNTGVINA------PEKNIENFMKDVYKDRYGEDISEEFIQQLYS 67
            |||..:.....|.:|.|.|||:||||:.      ||......:.||.|:                
Yeast    35 LTFKTSLIFVGATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKE---------------- 83

  Fly    68 VAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGV 132
            :..|..::|...|......:|:|:||:..|.:...:.|..|..|.   ::.:...|..||.::|:
Yeast    84 LITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMA---IARTLTFLICGRLLVGI 145

  Fly   133 NCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLG--IEQILGTNEGWPILLGLAI 195
            ..|::...||:::|||:|..:||.:.|:|.:|:|.|.|:|.|:.  :::|   :..|..|..|:.
Yeast   146 AVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYVIASLMKEI---DNSWRYLFALSA 207

  Fly   196 CPAILQLILLPVCPESPRY------LLITKQWEEEARKALRRLRASGSVEE----------DIEE 244
            .||||.|.:|...|||||:      :|.|       |.:||.|..:.|...          ::::
Yeast   208 IPAILFLSILDFIPESPRWSISKGDILYT-------RDSLRMLYPTASTYHVNSKIKQLIIELDK 265

  Fly   245 MRAEERAQ-----QSESHISTMELICSPTLRPP-------------------------------- 272
            :|..|.|.     ||:|.|..|:...|.||.||                                
Yeast   266 LRLYEDASEPLLVQSQSVIRYMDSSTSGTLSPPNIKRLSSNTERTSNTMSSSSAYLSALRGPAPN 330

  Fly   273 --------------------LIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIG 317
                                ||:|.::...||.:|.||..||:..:|  |....::.....|.|.
Yeast   331 GALASNKKKRHRMEPRTIRALIVGCMLMFFQQITGFNAFMYYAAIIF--SKFNIKNPLLPPILIA 393

  Fly   318 AIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLSVVATLGFVVFF 382
            :...:.|..::..||..|||.:.|..:..|.:..:..::.|...::     .|.:::.:.:|..:
Yeast   394 STNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCSVGFGHDQV-----NLLLISVVIYVAAY 453

  Fly   383 AVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPS-MKTALENYTFLPFSVFLAI 446
            |...||:|| ...|......|....:.....||:.|..|.:.:.| :.|..:..|.|.|:.|...
Yeast   454 ASAMGSVPW-TCVEFLPLNRRSFGASCIACTNWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVC 517

  Fly   447 FWIFTYKKVPETKNKTFEEILALFRHNNG 475
            .|.|.|...||.|..:.||:..:|  :||
Yeast   518 AWFFVYFWYPEVKGLSLEEVGRVF--DNG 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 126/516 (24%)
Sugar_tr 18..470 CDD:278511 132/533 (25%)
CIN10NP_010675.3 MFS_HMIT_like 45..528 CDD:340918 127/519 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
21.910

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