DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and RGT2

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:520 Identity:139/520 - (26%)
Similarity:236/520 - (45%) Gaps:80/520 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IFSAVLGMLQFGYNTGVINAPEKNIENFMKDV-YKDRYGEDISEEFIQQLYSVAVSIFAIGGMLG 80
            ||.||.|.| |||:||:||:        :.|: |...|.......|.....::.||..::|...|
Yeast   104 IFVAVGGFL-FGYDTGLINS--------ITDMPYVKTYIAPNHSYFTTSQIAILVSFLSLGTFFG 159

  Fly    81 GFSGGWMANRFGRKGGLL--------LNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLN 137
            .....::::.:|||..::        :.|.|.:|...|:          :|.:||.|.|:..|:.
Yeast   160 ALIAPYISDSYGRKPTIMFSTAVIFSIGNSLQVASGGLV----------LLIVGRVISGIGIGII 214

  Fly   138 TSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTN-----EGWPILLGLAICP 197
            :::||:|.:|.|..||||.:.:..|.|:|:|||:|..:.    .||:     ..:.|.:||....
Yeast   215 SAVVPLYQAEAAQKNLRGAIISSYQWAITIGLLVSSAVS----QGTHSKNGPSSYRIPIGLQYVW 275

  Fly   198 AILQLILLPVCPESPRYLLITKQWEEEARKALRRLRA----SGSVEEDIEEMRAEERAQQSESHI 258
            :.:..:.:...||||||.:: |....:|.|:|..||.    ...:.|::.|::|....:.|....
Yeast   276 SSILAVGMIFLPESPRYYVL-KDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPS 339

  Fly   259 STMELICSPTLRPPLII----GIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAI 319
            :.::...:...||..|:    ||.:|..||.||||.:|||..:.|.::|:  :::...:....|:
Yeast   340 TLLDCFKTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGV--DNSYLVSFISYAV 402

  Fly   320 MVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLSVVATLGFVVF--- 381
            .|..::..:.|:||.|||.:.|.|       .:.:.|:.|:..::......:|||:...:.|   
Yeast   403 NVAFSIPGMYLVDRIGRRPVLLAG-------GVIMAIANLVIAIVGVSEGKTVVASKIMIAFICL 460

  Fly   382 ----FAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANF--------VVGIGFPSMKTALEN 434
                |:...|.:.|:::|||:..|.|....||....||:.||        :|.:|  |..:::..
Yeast   461 FIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVG--SHTSSMGP 523

  Fly   435 YTFLPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRHNNGRSMLNCTNSLEPQSMNSGIEHAAL 499
            ..|..:.....:..|..|..|.||:..|.|||..|||        ...||:.....|..|....|
Yeast   524 KIFFIWGGLNVVAVIVVYFAVYETRGLTLEEIDELFR--------KAPNSVISSKWNKKIRKRCL 580

  Fly   500  499
            Yeast   581  580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 123/471 (26%)
Sugar_tr 18..470 CDD:278511 130/488 (27%)
RGT2NP_010143.1 SP 76..555 CDD:273317 129/485 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13429
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
43.810

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