DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and INT2

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_174313.1 Gene:INT2 / 839902 AraportID:AT1G30220 Length:580 Species:Arabidopsis thaliana


Alignment Length:567 Identity:161/567 - (28%)
Similarity:254/567 - (44%) Gaps:123/567 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFLTYS-------IFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSV 68
            |.||:.       .|||.:|.|.|||:||||:.....|.:..|.|.::.:           |..:
plant    19 FSLTWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTW-----------LQEM 72

  Fly    69 AVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVN 133
            .||:...|.::|...|||..::.||:..:|:.:.|.:.||.:|.   .:.:..:|.:||..:|:.
plant    73 IVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMA---AAPNPSLLVVGRVFVGLG 134

  Fly   134 CGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQV--LGIEQILGTNEGWPILLGLAIC 196
            .|:.:...|:||||.:|..:||.|.:.|...:|.|..||.:  |....:.||   |..:||:|..
plant   135 VGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGT---WRWMLGIAGI 196

  Fly   197 PAILQLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDI----EEMRAEERAQQSESH 257
            ||:||.:|:...|||||: |..|..||||:..|||:.::..||::|    :.:..|...:.|...
plant   197 PALLQFVLMFTLPESPRW-LYRKGREEEAKAILRRIYSAEDVEQEIRALKDSVETEILEEGSSEK 260

  Fly   258 ISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESA----KFATIGIGA 318
            |:.::|..:.|:|..||.|:.:|:.|||.|||.|.|||.::...:|......    ...|.|:.|
plant   261 INMIKLCKAKTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLVTAGLNA 325

  Fly   319 IMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFIT------------ISFLIKEMID------ 365
            .   .:::||..:||.||:.|.:..|.|:.|....:|            ||.|..:..:      
plant   326 F---GSIISIYFIDRIGRKKLLIISLFGVIISLGILTGVFYEAATHAPAISSLETQRFNNISCPD 387

  Fly   366 --------------------------------------WMSYLSV-------------------- 372
                                                  |:|..||                    
plant   388 YKSAMNTNAWDCMTCLKASSPSCGYCSSPIGKEHPGACWISDDSVKDLCHNENRLWYTRGCPSNF 452

  Fly   373 --VATLG---FVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTAL 432
              .|.||   :::||:.|.|::||::.:|::....|.....||...||::|.:|...|.|:..|:
plant   453 GWFALLGLGLYIIFFSPGMGTVPWIVNSEIYPLRFRGICGGIAATANWISNLIVAQSFLSLTEAI 517

  Fly   433 -ENYTFLPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRHNNGRSM 478
             .::|||.|.|...|..:|....|||||....|||..:...   |||
plant   518 GTSWTFLIFGVISVIALLFVMVCVPETKGMPMEEIEKMLER---RSM 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 147/526 (28%)
Sugar_tr 18..470 CDD:278511 155/543 (29%)
INT2NP_174313.1 SP 25..552 CDD:273317 153/547 (28%)
MFS 33..541 CDD:119392 147/528 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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