DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and ERD6

DIOPT Version :10

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_563830.1 Gene:ERD6 / 837414 AraportID:AT1G08930 Length:496 Species:Arabidopsis thaliana


Alignment Length:491 Identity:137/491 - (27%)
Similarity:231/491 - (47%) Gaps:70/491 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CAPGLTFFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVA 69
            |....:.||  |.|.||.|....|...|..:..:..|.            :|:|....:  ||:.
plant    52 CRVTASVFL--STFVAVSGSFCTGCGVGFSSGAQAGIT------------KDLSLSVAE--YSMF 100

  Fly    70 VSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFL--GRFIIGV 132
            .||..:||::|....|.:|:..|||..:|.....     |:.|:..|:.:...::|  ||.::|:
plant   101 GSILTLGGLIGAVFSGKVADVLGRKRTMLFCEFF-----CITGWLCVALAQNAMWLDCGRLLLGI 160

  Fly   133 NCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICP 197
            ..|:.:.::|:||:||||.::||.....|||....|:.|.      .|:|....|.:|..:.:.|
plant   161 GVGIFSYVIPVYIAEIAPKHVRGSFVFANQLMQNCGISLF------FIIGNFIPWRLLTVVGLVP 219

  Fly   198 AILQLILLPVCPESPRYLLITKQWEEEARKALRRLRAS--------GSVEEDIE------EMRAE 248
            .:..:..|...|||||:|....: ::|.|.:|:|||.|        .::.:.|:      |.:..
plant   220 CVFHVFCLFFIPESPRWLAKLGR-DKECRSSLQRLRGSDVDISREANTIRDTIDMTENGGETKMS 283

  Fly   249 ERAQQSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFAT 313
            |..|:..::              |||||:.:...||..|.:.|.||::|||...|.   .:...|
plant   284 ELFQRRYAY--------------PLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGF---PSAIGT 331

  Fly   314 IGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISF------LIKEMIDWMSYLSV 372
            ..|..|||...:::..|:|:.|||||.:.....|.:.::.:::|:      ::.|:   ....:.
plant   332 SVIATIMVPKAMLATVLVDKMGRRTLLMASCSAMGLSALLLSVSYGFQSFGILPEL---TPIFTC 393

  Fly   373 VATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENYTF 437
            :..||.:|.||:|.|.:||:|.||:|....:.||..:..:.||:..:::...|..|.....:..|
plant   394 IGVLGHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTVTNWLFGWIITYTFNFMLEWNASGMF 458

  Fly   438 LPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRHN 473
            |.||:..|...:|.|..|||||.::.|||.||..::
plant   459 LIFSMVSASSIVFIYFLVPETKGRSLEEIQALLNNS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS_GLUT_Class1 15..461 CDD:340989 129/467 (28%)
ERD6NP_563830.1 MFS_GLUT6_8_Class3_like 59..486 CDD:340916 131/474 (28%)

Return to query results.
Submit another query.