DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and ERD6

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_001031006.1 Gene:ERD6 / 837414 AraportID:AT1G08930 Length:496 Species:Arabidopsis thaliana


Alignment Length:491 Identity:137/491 - (27%)
Similarity:231/491 - (47%) Gaps:70/491 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CAPGLTFFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVA 69
            |....:.||  |.|.||.|....|...|..:..:..|.            :|:|....:  ||:.
plant    52 CRVTASVFL--STFVAVSGSFCTGCGVGFSSGAQAGIT------------KDLSLSVAE--YSMF 100

  Fly    70 VSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFL--GRFIIGV 132
            .||..:||::|....|.:|:..|||..:|.....     |:.|:..|:.:...::|  ||.::|:
plant   101 GSILTLGGLIGAVFSGKVADVLGRKRTMLFCEFF-----CITGWLCVALAQNAMWLDCGRLLLGI 160

  Fly   133 NCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICP 197
            ..|:.:.::|:||:||||.::||.....|||....|:.|.      .|:|....|.:|..:.:.|
plant   161 GVGIFSYVIPVYIAEIAPKHVRGSFVFANQLMQNCGISLF------FIIGNFIPWRLLTVVGLVP 219

  Fly   198 AILQLILLPVCPESPRYLLITKQWEEEARKALRRLRAS--------GSVEEDIE------EMRAE 248
            .:..:..|...|||||:|....: ::|.|.:|:|||.|        .::.:.|:      |.:..
plant   220 CVFHVFCLFFIPESPRWLAKLGR-DKECRSSLQRLRGSDVDISREANTIRDTIDMTENGGETKMS 283

  Fly   249 ERAQQSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFAT 313
            |..|:..::              |||||:.:...||..|.:.|.||::|||...|.   .:...|
plant   284 ELFQRRYAY--------------PLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGF---PSAIGT 331

  Fly   314 IGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISF------LIKEMIDWMSYLSV 372
            ..|..|||...:::..|:|:.|||||.:.....|.:.::.:::|:      ::.|:   ....:.
plant   332 SVIATIMVPKAMLATVLVDKMGRRTLLMASCSAMGLSALLLSVSYGFQSFGILPEL---TPIFTC 393

  Fly   373 VATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENYTF 437
            :..||.:|.||:|.|.:||:|.||:|....:.||..:..:.||:..:::...|..|.....:..|
plant   394 IGVLGHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTVTNWLFGWIITYTFNFMLEWNASGMF 458

  Fly   438 LPFSVFLAIFWIFTYKKVPETKNKTFEEILALFRHN 473
            |.||:..|...:|.|..|||||.::.|||.||..::
plant   459 LIFSMVSASSIVFIYFLVPETKGRSLEEIQALLNNS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 122/456 (27%)
Sugar_tr 18..470 CDD:278511 132/473 (28%)
ERD6NP_001031006.1 MFS_GLUT6_8_Class3_like 59..486 CDD:340916 131/474 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.