DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and PMT6

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_195385.1 Gene:PMT6 / 829820 AraportID:AT4G36670 Length:493 Species:Arabidopsis thaliana


Alignment Length:490 Identity:135/490 - (27%)
Similarity:238/490 - (48%) Gaps:44/490 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAI 75
            |.|..:|.::::.:: |||:|||::.....||            ||:....:|  ..|...|..:
plant    16 FALQCAIVASIVSII-FGYDTGVMSGAMVFIE------------EDLKTNDVQ--IEVLTGILNL 65

  Fly    76 GGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSL 140
            ..::|....|..::..||:..::|.::|.:.|:.|||:   ..:|.:|..||...|:..|....:
plant    66 CALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGW---GPNYPVLLSGRCTAGLGVGFALMV 127

  Fly   141 VPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLG-IEQILGTNEGWPILLGLAICPAILQLIL 204
            .|:|.:|||..:.||.|.::..|.:::|:||..::. ....|..:.||.::||:|..|:::....
plant   128 APVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFG 192

  Fly   205 LPVCPESPRYLL-------------ITKQWEEEARKALRRLRASGSVE----EDIEEMRAEERAQ 252
            :...|||||:|:             :.....|||....:.::|:..::    :|:.:|  |.:..
plant   193 ILKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKM--EGKKT 255

  Fly   253 QSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKF-ATIGI 316
            ..|.....:.|..:|.:|..|:..:.:...|..|||.||..|...:|..:|:|.:...| .|||:
plant   256 HGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGV 320

  Fly   317 GAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKE----MIDWMSYLSVVATLG 377
            |.:.......:..|:|:.|||.|.|..:|||.|....:.....:.:    .:.|...||:||...
plant   321 GIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYS 385

  Fly   378 FVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTAL-ENYTFLPFS 441
            ||.||::|.|.|.|:.::|:|....|....::.|.||.:.|..|.:.|.|:.:|: ....|..|:
plant   386 FVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFA 450

  Fly   442 VFLAIFWIFTYKKVPETKNKTFEEILALFRHNNGR 476
            ...|:.|.|.:..:||||.|:.|||.|||:.:..:
plant   451 GVAAVAWNFFFFLLPETKGKSLEEIEALFQRDGDK 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 122/458 (27%)
Sugar_tr 18..470 CDD:278511 130/475 (27%)
PMT6NP_195385.1 Sugar_tr 20..479 CDD:278511 131/478 (27%)
MFS 22..463 CDD:119392 122/460 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.