DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glut1 and AT3G20460

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_188681.1 Gene:AT3G20460 / 821591 AraportID:AT3G20460 Length:488 Species:Arabidopsis thaliana


Alignment Length:471 Identity:124/471 - (26%)
Similarity:223/471 - (47%) Gaps:46/471 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LTFFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDIS-EEFIQQLYSVAVSI 72
            :|..|.::.|:|:.|...:|...|..:..:..|          ..|.::| .||     |...::
plant    49 VTLILLFTTFTALCGTFSYGTAAGFTSPAQTGI----------MAGLNLSLAEF-----SFFGAV 98

  Fly    73 FAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLN 137
            ..|||::|....|.:|:.|||:|.|.::|...:||..::.|::.:.|   |.:||..:||..|:.
plant    99 LTIGGLVGAAMSGKLADVFGRRGALGVSNSFCMAGWLMIAFSQATWS---LDIGRLFLGVAAGVA 160

  Fly   138 TSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQL 202
            :.:||:||.||||..:||....:|.|.:...      :.:..:||:...|..|..::..|.:.:.
plant   161 SYVVPVYIVEIAPKKVRGTFSAINSLVMCAS------VAVTYLLGSVISWQKLALISTVPCVFEF 219

  Fly   203 ILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQ----QSESHISTMEL 263
            :.|...|||||:|....: .:|:..:|:|||.:.:   ||.:..||.:..    |........:|
plant   220 VGLFFIPESPRWLSRNGR-VKESEVSLQRLRGNNT---DITKEAAEIKKYMDNLQEFKEDGFFDL 280

  Fly   264 ICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVS- 327
            . :|.....:.:||.:.:.||..|::...:|.:|:|..||...      .:|:....||.::.| 
plant   281 F-NPRYSRVVTVGIGLLVLQQLGGLSGYTFYLSSIFKKSGFPN------NVGVMMASVVQSVTSV 338

  Fly   328 --IPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLSVVATLGFVVF---FAVGPG 387
              |.::|:.|||:|.......|.:.|:...:|||.:.......|..:...:|.:||   ..:|.|
plant   339 LGIVIVDKYGRRSLLTVATIMMCLGSLITGLSFLFQSYGLLEHYTPISTFMGVLVFLTSITIGIG 403

  Fly   388 SIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENYTFLPFSVFLAIFWIFTY 452
            .|||::.:|:.....:.||..:..|.:|.:|:.|...|..:.....:..|..:::...:..:|..
plant   404 GIPWVMISEMTPINIKGSAGTLCNLTSWSSNWFVSYTFNFLFQWSSSGVFFIYTMISGVGILFVM 468

  Fly   453 KKVPETKNKTFEEILA 468
            |.||||:.::.|||.|
plant   469 KMVPETRGRSLEEIQA 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 113/445 (25%)
Sugar_tr 18..470 CDD:278511 122/462 (26%)
AT3G20460NP_188681.1 MFS_GLUT6_8_Class3_like 54..481 CDD:340916 118/461 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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