DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glut1 and AT3G19940

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_188628.1 Gene:AT3G19940 / 821532 AraportID:AT3G19940 Length:514 Species:Arabidopsis thaliana


Alignment Length:486 Identity:135/486 - (27%)
Similarity:238/486 - (48%) Gaps:47/486 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GLTFFLTYSIFSAVLGMLQFGYNTGV---INAPEK-------NIENFMKDVYKD----RYGEDIS 58
            |:|.|:..:...|.:|.|.|||:.|:   :.:.|:       .:|:.||....|    ::...:.
plant    20 GVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQML 84

  Fly    59 EEFIQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEML 123
            :.|...||        :..::..|....:..:.|||..:.:..:..:.||.   |...:.:..||
plant    85 QLFTSSLY--------LAALVASFMASVITRKHGRKVSMFIGGLAFLIGAL---FNAFAVNVSML 138

  Fly   124 FLGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWP 188
            .:||.::||..|......|:|:||:||..:||.|....|:|:|:|:|::.::..........||.
plant   139 IIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWR 203

  Fly   189 ILLGLAICPAILQLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEM-RAEERAQ 252
            :.||||..||::.:|...:.|::|..:| .:...|||::.|:::|.:.:|:.:.::: .|.|.|:
plant   204 VSLGLAAVPAVVMVIGSFILPDTPNSML-ERGKNEEAKQMLKKIRGADNVDHEFQDLIDAVEAAK 267

  Fly   253 QSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIG 317
            :.|   :..:.|.....||.||....:...||.:|||.:.:|:..||.:.|..:::|..:.:..|
plant   268 KVE---NPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITG 329

  Fly   318 AIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSI----FITISF-------LIKEMIDW-MSYL 370
            .:.::.|.|||..:||.|||.|.|.|...|||..:    ||...|       |.....|| ::::
plant   330 VVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFI 394

  Fly   371 SVVATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENY 435
            .|     :|..||...|.:.|::.:|:.....||:..||.|.||....|::|..|.:|...::..
plant   395 CV-----YVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFG 454

  Fly   436 TFLPFSVFLAIFWIFTYKKVPETKNKTFEEI 466
            .|..|:..:||..:|.|..:||||....||:
plant   455 LFYFFASMVAIMTVFIYFLLPETKGVPIEEM 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 125/461 (27%)
Sugar_tr 18..470 CDD:278511 132/476 (28%)
AT3G19940NP_188628.1 Sugar_tr 29..489 CDD:278511 132/477 (28%)
MFS 79..475 CDD:119392 114/415 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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