DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and PMT5

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_188513.1 Gene:PMT5 / 821416 AraportID:AT3G18830 Length:539 Species:Arabidopsis thaliana


Alignment Length:505 Identity:132/505 - (26%)
Similarity:233/505 - (46%) Gaps:61/505 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AFLCAPGLTFFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLY 66
            ||.||          |.:::..:| .||:.||::.....|:..:|                  :.
plant    36 AFACA----------ILASMTSIL-LGYDIGVMSGAMIYIKRDLK------------------IN 71

  Fly    67 SVAVSIFA----IGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGR 127
            .:.:.|.|    |..::|..:.|..::..||:..::|...:..|||.|||   :|.:|..|..||
plant    72 DLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMG---LSPNYAFLMFGR 133

  Fly   128 FIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIE-QILGTNEGWPILL 191
            ||.|:..|....:.|:|.:|::|.:.||.|.:..::.:..|::|..|..:. ..|....||.::|
plant   134 FIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLML 198

  Fly   192 GLAICPAILQLILLPVCPESPRYLLI-------------TKQWEEEARKALRRLRASGSVEEDIE 243
            |:...|:::..|.:...|||||:|::             |.....||...|..::.:..:..|..
plant   199 GIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLEDIKHAAGIPADCH 263

  Fly   244 EMRAEERAQQSESHISTMELICSPT--LRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGL-T 305
            :...:...:.|.......||:..||  :|..:|..|.:...||.|||:||..:|..:|.::|| |
plant   264 DDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKT 328

  Fly   306 EESAKFATIGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFI----FSIFITISFLIKEMIDW 366
            :.....||:.:|.:.....||:..|:||.|||.|.|..:|||.:    ....:||....::.:.|
plant   329 DHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMW 393

  Fly   367 MSYLSVVATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGF-PSMKT 430
            ...:::...:.:|..|::|.|.|.|:.::|:|....|....::.|:||.:.:.|:.|.| |..|.
plant   394 AVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKA 458

  Fly   431 ALENYTFLPFSVFLAIFWIFTYKKVPETKNKTFE---EILALFRHNNGRS 477
            ......|..|.....:.|:|.|..:|||:.:..|   |:.:.||..:.:|
plant   459 MTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSGFRWRDSKS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 119/460 (26%)
Sugar_tr 18..470 CDD:278511 124/480 (26%)
PMT5NP_188513.1 MFS_PLT 42..494 CDD:340995 123/473 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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