DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and INT3

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_181117.1 Gene:INT3 / 818146 AraportID:AT2G35740 Length:580 Species:Arabidopsis thaliana


Alignment Length:568 Identity:159/568 - (27%)
Similarity:260/568 - (45%) Gaps:121/568 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAIGGMLGGFS 83
            ||.:|.|.||||||||......|        |:.:||..::.::|:   :.||:...|.::|...
plant    32 SAGIGGLLFGYNTGVIAGALLYI--------KEEFGEVDNKTWLQE---IIVSMTVAGAIVGAAI 85

  Fly    84 GGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMYISEI 148
            |||..::|||:..:|:.:||.:.||.:|   .::|:..::.|||.::|...|:.:...|:||||:
plant    86 GGWYNDKFGRRMSVLIADVLFLLGALVM---VIAHAPWVIILGRLLVGFGVGMASMTSPLYISEM 147

  Fly   149 APLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPESPR 213
            :|..:||.|.:.|.|.:|.|..||.::.: ..:.|...|..:||::..|||:|..|:...|||||
plant   148 SPARIRGALVSTNGLLITGGQFLSYLINL-AFVHTPGTWRWMLGVSAIPAIIQFCLMLTLPESPR 211

  Fly   214 YLLITKQWEEEARKALRRLRASGSVEEDI----EEMRAEERAQQSESHISTMEL---ICSPTLRP 271
            :|....: :.|:|..|.|:..:..||.:|    |.:|||...:....|..:.:|   :.:|.:|.
plant   212 WLYRNDR-KAESRDILERIYPAEMVEAEIAALKESVRAETADEDIIGHTFSDKLRGALSNPVVRH 275

  Fly   272 PLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFA----TIGIGAIMVVMTLVSIPLMD 332
            .|..||.:|::|||.|||.|.|||.::...:|........|    |.|:.|   |.::||:..:|
plant   276 GLAAGITVQVAQQFVGINTVMYYSPTILQFAGYASNKTAMALALITSGLNA---VGSVVSMMFVD 337

  Fly   333 RTGRRTLHLYGLGGMFIFSIFITISFLIKE------MID-------------------------- 365
            |.|||.|.:..:.|  |.:..:.::.:..|      .||                          
plant   338 RYGRRKLMIISMFG--IITCLVILAAVFNEASNHAPKIDKRDSRNFAKNATCPAFAPFTASRSPP 400

  Fly   366 --W---------------------------------------------------MSYLSVVATLG 377
              |                                                   ..||::|....
plant   401 SNWNCMKCLQYDCGFCSNGAQEYAPGACIVQSADMKALCHSKGRTFFKDGCPSKFGYLAIVFLGL 465

  Fly   378 FVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTAL-ENYTFLPFS 441
            :::.:|.|.|::||::.:|::....|..|..||.:.|||:|.||...|.::..|: .:.|||.|:
plant   466 YIIVYAPGMGTVPWIVNSEIYPLRYRGLAGGIAAVSNWMSNLVVSETFLTLTNAVGSSGTFLLFA 530

  Fly   442 VFLAIFWIFTYKKVPETKNKTFEEILALFRHNNGRSMLNCT---NSLE 486
            ...|:...|.:..|||||...|||:..|.......|:|..|   |.:|
plant   531 GSSAVGLFFIWLLVPETKGLQFEEVEKLLEGGFRPSLLRPTTKENQVE 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 145/529 (27%)
Sugar_tr 18..470 CDD:278511 153/547 (28%)
INT3NP_181117.1 SP 1..555 CDD:273317 152/543 (28%)
MFS 31..>364 CDD:119392 114/352 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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