DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and Glut3

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_536732.1 Gene:Glut3 / 42036 FlyBaseID:FBgn0015230 Length:507 Species:Drosophila melanogaster


Alignment Length:461 Identity:109/461 - (23%)
Similarity:193/461 - (41%) Gaps:54/461 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAIGGMLGGFSGGW 86
            :|...||...|.....|:::        .:::........:|  :|....:..:|..|.....|.
  Fly    60 IGSFFFGIAVGWSGTAERSV--------MEQHSYSFQPTELQ--WSGVCILLTLGAALWCLPMGL 114

  Fly    87 MANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMYISEIAPL 151
            |....|.:..:|:..:....|..|..|.:   |..||:.|||.:|:..|.:..:||:|.:||:..
  Fly   115 MVRLLGCRRTILIQLLPNFLGWFLTVFAR---SVPMLYAGRFFLGMCGGAHCVVVPIYNAEISTT 176

  Fly   152 NLRGGLGTVNQLAVTVGLL----LSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPESP 212
            ..||.:|.|.:.|...|::    :|..|.:..|...|.|.     ||:.|  ||:::    ||||
  Fly   177 KKRGAMGVVFEGACICGVIYSFAMSLFLELRIINFVNLGL-----LALGP--LQILM----PESP 230

  Fly   213 RYLL----ITKQWEEEARKALRRLRASG-SVEEDIEEMRAEERAQQSESHISTMELICSPTLRPP 272
            .|.:    |.:     |..:||.||... ....:|:.:..:....:.|.....:.......:|..
  Fly   231 AYYVDHGNIPR-----AEDSLRFLRGQKYDTRREIDFLTRDPTESEREVRQGPLLGFKYKKVRRS 290

  Fly   273 LIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDRTGRR 337
            |...:.:.|.|:..|.....:|..::.....:..|......:|    :::..|....|:||.|||
  Fly   291 LARSLAIALLQKLCGALIFIFYGLNMLDCLRIRREFGLILCLG----LILGFLACFFLVDRLGRR 351

  Fly   338 TLHLYGLGGMFIFSIFITISFLIKEMIDW-------MSYLSVVATLGFVVFFAVGPGSIPWMITA 395
            .|.::...|:...||::.:.|.:     |       ||::::.....||..:..|.||:.|::.|
  Fly   352 PLLIFSSAGIVFVSIYLGLHFKV-----WMTMGLTVMSWIALFCIAIFVGCYTAGVGSLTWVLNA 411

  Fly   396 ELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTALENYTFLPFSVFLAIFWIFTYKKVPETKN 460
            ||..:..||...:|....||:..|.|...|.|.....:.|.||.|::..::..:|:...:||||.
  Fly   412 ELLVRPMRPLGCSIVCAFNWLTAFFVICWFGSHGVKCQPYLFLLFAIIASLILLFSLIYIPETKK 476

  Fly   461 KTFEEI 466
            .:..:|
  Fly   477 LSSAKI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 104/445 (23%)
Sugar_tr 18..470 CDD:278511 109/461 (24%)
Glut3NP_536732.1 Sugar_tr 60..484 CDD:278511 109/461 (24%)
MFS 63..>226 CDD:119392 44/182 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
21.910

Return to query results.
Submit another query.