DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and CG15408

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_608767.1 Gene:CG15408 / 33548 FlyBaseID:FBgn0031523 Length:466 Species:Drosophila melanogaster


Alignment Length:453 Identity:113/453 - (24%)
Similarity:188/453 - (41%) Gaps:89/453 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GEDISEEFIQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSH 118
            |.::..||   ..|...|:..:|.:.|....|.:..|.|.|..|||   :.|..:|.......:.
  Fly    55 GFEVKSEF---EISWVGSMLGMGSVTGNILIGCLLGRLGSKRCLLL---IAIPHSCFWILVYFAQ 113

  Fly   119 SYEMLFLGRFIIGVNCGLNTSLV-PMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILG 182
            |.|.|::||.:.|: ||....:| |:.:||||..|:||....:..|:|.||:|:..::|...   
  Fly   114 SVEYLYVGRLLAGI-CGGGMYIVHPILLSEIADANIRGTFSAMVMLSVNVGILVGYIIGTHL--- 174

  Fly   183 TNEGWPILLGLAICPAILQLILLPVCPESPRYLLITKQWE--EEARKALRRLRASGSVE------ 239
              ..:.|.|.:.|.|....:.:|....|||.:|:...::.  |.:.:..:.::.|.::.      
  Fly   175 --PYYSIPLMVLILPLWYLISVLLFIKESPMHLIRIGKYSAAERSFRYYKNIKDSDNIHDQNRAM 237

  Fly   240 EDIEEMR-AEERAQQSESHISTMELICSPTLR---PPLIIGIVMQLSQQFSGINAVFYYSTSLFM 300
            |:.|.|: |..:....:..::..:....|.|:   |.|    |:.::.||||:..:..|.:.:|.
  Fly   238 EEFEIMKIALTKGDALQDAVTFKDFYSRPALKAYGPAL----VLLIANQFSGLFTMVNYMSDIFA 298

  Fly   301 SSGLTEESAKFATIGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFI----FSIFITI--SFL 359
            :||.|.: ....||.|||:.::.|.|:..|.|..||:.|.|...||:.|    |..|...  |..
  Fly   299 NSGSTMD-PDTCTIIIGAVQILGTYVTTLLCDICGRKLLMLVSTGGVAISLTAFGFFTKYAESHN 362

  Fly   360 IKEMIDWMSYLSV-----VATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANF 419
            |.| ..|:..|.:     :..:|.|..|.|.        ..|:|....|..|.::|::|      
  Fly   363 IGE-YSWIPLLLMSMDIFLGNIGLVGCFFVS--------LVEMFPVKIRAKAASMAIVV------ 412

  Fly   420 VVGIGFPSMKTALENYTFLPFSVF---------LAIFW-----------IFTYKKVPETKNKT 462
                        ...:.||..::|         .|..|           .||| .:.|||.|:
  Fly   413 ------------CSIFVFLMLNIFPICMKQWGISATMWSCAGVTALSSLYFTY-FMKETKGKS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 107/441 (24%)
Sugar_tr 18..470 CDD:278511 113/453 (25%)
CG15408NP_608767.1 2A0115 17..410 CDD:273327 99/380 (26%)
MFS 60..455 CDD:119392 108/439 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
21.910

Return to query results.
Submit another query.