DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and itr1

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_593858.2 Gene:itr1 / 2543145 PomBaseID:SPAC4F8.15 Length:575 Species:Schizosaccharomyces pombe


Alignment Length:487 Identity:141/487 - (28%)
Similarity:238/487 - (48%) Gaps:58/487 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FSAVLGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDIS---EEFIQQLYSVAVSIFAIGGML 79
            |:|.:|.|.|||:||||:.....|...:.       |.:::   :|||       .|..::|.:|
pombe    92 FAAGIGGLLFGYDTGVISGALVVIGTSLG-------GHELTNGGKEFI-------TSATSLGALL 142

  Fly    80 GGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMY 144
            ||...|.:|:.||||..:.:.:::.|.|:.:.  ....|.:.|: :|||:||...|:.:.::|:|
pombe   143 GGIIAGALADFFGRKPVIAIASIIIIVGSIVQ--VTAHHLWHMI-VGRFVIGWGVGIASLIIPLY 204

  Fly   145 ISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQIL-GTNEGWPILLGLAICPAILQLILLPVC 208
            :|||||..:||.|..:..|.:|.|.:::  .||:... ..:.||..::|||:.||..||.:|...
pombe   205 LSEIAPSKIRGRLVIIYVLLITAGQVIA--YGIDTAFEHVHNGWRWMVGLAMVPAAFQLFILIWL 267

  Fly   209 PESPRYLLITKQWEEEARKALRRLRASGS----------VEEDIEEMRAEERAQQSESHISTM-E 262
            ||||| ||:.|:..:||...|.|:..:..          ::|.:.:..:..|.|:.   :.|. |
pombe   268 PESPR-LLVKKERSQEAYNTLARIYPTAHPYEIKTKLYLIQEGVRDPFSGSRWQKI---VKTFKE 328

  Fly   263 LICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVS 327
            |..:|:....||:...:|..||.||.|::.|:|:::|...|....:|  ..:.|.|...|.|:|:
pombe   329 LYFNPSNFRALILACGLQAMQQLSGFNSLMYFSSTIFEVVGFNNPTA--TGLIIAATNFVFTIVA 391

  Fly   328 IPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEMIDWMSYLS-------VVATLGFVVF---F 382
            ..::|..|||.|.|..:.||....|...::|......:..:|.|       :|..:..:|:   :
pombe   392 FGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASY 456

  Fly   383 AVGPGSIPWMITAELFSQGPRPSAMAIAVLVNWMANFVVGIGFPSMKTAL-ENYTFLPFSVFLAI 446
            |.|.|::||. .:|||....|.....::..|||..|..:|..|.::.:.: ...||..:.....:
pombe   457 ASGLGNLPWQ-QSELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPTGTFALYGGLCFL 520

  Fly   447 FW---IFTYKKVPETKNKTFEEILALFRHNNG 475
            .|   :|.|   |:..:.|.|||..|.:|..|
pombe   521 GWLGALFCY---PDLTDYTIEEIGELLKHGFG 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 132/462 (29%)
Sugar_tr 18..470 CDD:278511 138/480 (29%)
itr1NP_593858.2 Sugar_tr 90..544 CDD:278511 138/480 (29%)
MFS 92..529 CDD:119392 132/462 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13833
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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