DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glut1 and ght8

DIOPT Version :9

Sequence 1:NP_612073.2 Gene:Glut1 / 38109 FlyBaseID:FBgn0264574 Length:1440 Species:Drosophila melanogaster
Sequence 2:NP_587746.1 Gene:ght8 / 2539300 PomBaseID:SPCC548.06c Length:547 Species:Schizosaccharomyces pombe


Alignment Length:591 Identity:135/591 - (22%)
Similarity:236/591 - (39%) Gaps:115/591 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GLTFFLTYSIFSAVLGMLQFGYNTGVINAPEKNIENFMKDV---YKDRYGEDISEEFIQQLYS-- 67
            |.|..:...:|.::.|.: ||.:||.|.    .|.| |:|.   :.|||..      :...||  
pombe     2 GKTLTIVMLVFVSMAGWM-FGADTGSIG----GITN-MRDFQSRFADRYNP------VTDTYSYS 54

  Fly    68 -----VAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGR 127
                 :...:..:|.|.|......:.:|.|::..::...::.:.|..|. .|.|. |:..:.:.:
pombe    55 SARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQ-VTAVP-SWVQIMVAK 117

  Fly   128 FIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGIEQILGTNE-----GW 187
            ...|:..|..:.|.|.:.||:||..|||.:.|..|||||.|:.::..:.    :||::     .|
pombe   118 IWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFIAACIN----MGTHKLHKTAQW 178

  Fly   188 PILLGLAICPAILQLILLPVCPESPRYLLITKQWEEEARKALRRLRASGSVEEDIEEM------R 246
            .:.:|:.:...|:..|.:...|||||||:                 |.|..||.::.|      .
pombe   179 RVSMGINLLWGIIMFIGISFLPESPRYLI-----------------AIGKDEEALDIMCKNNVLP 226

  Fly   247 AEERAQQSESHI-------------STMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSL 298
            .|....|:|.|:             :|...|....:|....:|:.:...||.:|.|..|||...:
pombe   227 REHEIIQTEYHVIKTDCEAEMAGGPATWGDILGADIRYRTFLGLGVMSLQQLTGDNYYFYYGFEV 291

  Fly   299 FMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIKEM 363
            |..:|:  .|...:.:.:.|:....|...:.:::..|||.       .:.|..::.:|:|.|...
pombe   292 FEGTGM--NSPYLSALILDAVNFGCTFGGLFVLEFFGRRM-------PLIIGGVWQSITFFIYAA 347

  Fly   364 IDWMSY-------------LSVVATLGFVVFFAVGPGSIPWMITAELFSQGPRPSAMAIAVLVNW 415
            :...:.             :.:|.:..|:..||...|...::|..|.:....|....|:|...||
pombe   348 VGNRALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIRYRSKCAAVATTGNW 412

  Fly   416 MANFVVGIGFPSMKTAL---ENYTFLPFSVFLA-IFWIFTYKKVPETKNKTFEEILALFRHNNGR 476
            :..|::....|.:..::   ..|.|...::..| |.::|.:    |||..|.|||..|:      
pombe   413 LWGFLITFFTPFISDSIGFKYGYIFAACNLCAACIIFLFAH----ETKGLTLEEINELY------ 467

  Fly   477 SMLNCTNSLEPQSMNSGIEHAALMVSEEKTQHDSLFGTTSFSL---TVEGMGPYPLSDSTNLLGP 538
              |:......|:..|.|  .||....|...:...:.|.::..|   ..|||..   :.|.::...
pombe   468 --LSGAKPWMPRPENLG--QAAKQQQEVLEKSRGVQGESAAHLENVDNEGMED---TSSNDITSS 525

  Fly   539 GSSSYG 544
            .|||.|
pombe   526 TSSSEG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glut1NP_612073.2 MFS 17..452 CDD:119392 108/485 (22%)
Sugar_tr 18..470 CDD:278511 115/502 (23%)
ght8NP_587746.1 MFS 10..451 CDD:119392 107/484 (22%)
Sugar_tr 11..467 CDD:278511 115/503 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
32.810

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